Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq23 158 1e-33 seq19 82.4 9e-11 seq9 82.4 9e-11 >seq23 Length=1180511 Score = 158 bits (174), Expect = 1e-33 Identities = 556/857 (65%), Gaps = 21/857 (2%) Strand=Plus/Minus Query 106457 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 106516 || || ||||| || || | ||||| || |||||||| ||| |||||||| | | Sbjct 328032 GGCAGCGCGATGGAGGCGAGGTTGCATACGGCCGTCTCCTCCGGCGACGTGTACTCGACA 327973 Query 106517 ATTTCTGTACACAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTG 106576 ||||| || |||| ||| || | ||| |||||||| | ||||| ||||| ||| || Sbjct 327972 ATTTCAGTGCACAGGTTCGAGCACTTGATCGTCCCAAGGTTCTTCTGGTTTGACTTGCTG 327913 Query 106577 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATT 106636 ||||| ||||||||||| || ||| | ||| |||||||| |||| |||| || || Sbjct 327912 TTGCATGCATCCTTGTACAGGATGAACGGCCCGCCCGTCTCGATCTGAGACTCCAGGATG 327853 Query 106637 GCCTTCCACACAT-CGGCGGCTGGTACAATGGCGTTG---GCCCGTCCCTCCGCCTCGTA 106692 || |||||| | | ||| |||| || | ||| | ||||| ||||||||||| Sbjct 327852 GCAAACCACACCTCCTGCGCCTGG----ATCGTCTTGACACCGCGTCCTTCCGCCTCGTA 327797 Query 106693 CTTTGTGTAGAGGGCTTCAAACTCCTCACCCACCGC-GTCGGAGAGACCTGGTGCCTTGT 106751 |||||| || ||| |||| ||| || |||| ||| || || | ||| Sbjct 327796 GCGCTCGTAGAGCCGCTCGAACGCCTC-GCCATGGCAGTCGCTGAGGCCCGGGCACGTGT 327738 Query 106752 CTGGACAGAAAAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAA 106811 || | || | ||| | || | | || ||||||||||| | ||| || | Sbjct 327737 TAGGGTCCATCAGCGTCCACCGCCCCTCACTTTTGACACGCTTCATGAACAAGTCCGGGA 327678 Query 106812 TCCACAGGGATGAAAAGAGATCTCTACACCGAGCCTCTTCGTCACCTTGGTTGAG--TC- 106868 |||||| | | ||||| || | || || || | ||| |||| | || Sbjct 327677 TCCACAACGCGTAGAAGAGGTCACGGGCGCGCTGGTCATCCTTTCCTGTGTTGCGCTTCA 327618 Query 106869 GTAACTCAAGGAACTCCATGATATCCGCGTGCCATGGCTCAAGATAGACTGCGATAGATC 106928 | ||| ||||| | | || ||| || ||||| ||||| |||||||| |||| | | Sbjct 327617 GCAAC---AGGAAACCAAAGACATCGGCATGCCAGGGCTCGAGATAGACGGCGAAGGCGC 327561 Query 106929 CCTTTCG---ACGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAATACGCGAAGCA 106985 |||| || || || | || | ||| ||||| || ||| ||| || ||||| |||| Sbjct 327560 CCTTGCGCTTACCGCCGCCCTGGTCTACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCA 327501 Query 106986 TTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAATACGAGAT-TTATTGGCTCTC 107044 |||| | | || | || || || || || ||| || | ||| | Sbjct 327500 TTGGTACGAGTCCGTTCGACGTGCCGTTGGTTCCAGCAAT-GTAGCTGCCGGCGGCGCGG 327442 Query 107045 ACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCGCACACTCCGTA 107104 | | || | |||| |||||||| || ||| ||| ||| || |||||| | Sbjct 327441 ATGTTGTGCACATGCAGACCAATACCGCCGGCCGCCTTGCTGATCACGGCGCACTCCTTC 327382 Query 107105 AGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGAAGCAACTGGAC 107164 || || | ||||| |||| ||| ||| ||||| || | |||||||| | | Sbjct 327381 AGCGTATCGTAGATGCCGTCGATGCTGTCGTCCTTCGACGCCACCAGGAAGCACGAGCTC 327322 Query 107165 ATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAATGAACATACCT 107224 || ||||| | || || ||||| |||||||||||||| || ||||| |||| | || Sbjct 327321 ATTTGCGGCTTCGGGGTGCCAGCGTTGAAGAGGGTTGGAGTAGCGTGGGTGAAAAAGCCC 327262 Query 107225 TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCGTGGATGCCGATG 107284 |||||| | ||| ||||| || | | ||| ||||||||||| | | Sbjct 327261 ATCGACATCAGATTGTACGTCTCACGCACGTTGTTGAGATCTCTGCCGTGGATGCCAAGG 327202 Query 107285 GCCACACGCATAAACAT 107301 || |||||||||||||| Sbjct 327201 GCGACACGCATAAACAT 327185 >seq19 Length=848869 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 136164 GCTCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATC 136223 |||| |||||||||| ||| ||||| | ||||| ||||||| | ||||||||||| | || Sbjct 616004 GCTCCTATAGTGTAGCGGTTATCACCTCGGACTCTGAATCCGATAACCCTGGTTCGAGTC 616063 Query 136224 CAGGTAGGAG 136233 |||||||||| Sbjct 616064 CAGGTAGGAG 616073 >seq9 Length=705808 Score = 82.4 bits (90), Expect = 9e-11 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 136164 GCTCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATC 136223 |||| |||||||||| ||| ||||| | ||||| ||||||| | ||||||||||| | || Sbjct 452979 GCTCCTATAGTGTAGCGGTTATCACCTCGGACTCTGAATCCGATAACCCTGGTTCGAGTC 452920 Query 136224 CAGGTAGGAG 136233 |||||||||| Sbjct 452919 CAGGTAGGAG 452910 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980527133880