Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17]
37 sequences; 32,907,781 total letters
Query= NC_019491.1
Length=291144
Score E
Sequences producing significant alignments: (Bits) Value
seq23 260 3e-64
seq17 147 4e-30
>seq23
Length=1180511
Score = 260 bits (288), Expect = 3e-64
Identities = 972/1496 (65%), Gaps = 57/1496 (4%)
Strand=Plus/Minus
Query 212694 AGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCG-GCCATGTCTATGAT 212752
|||||||| || || |||||| ||| || || | | ||| ||| |||||||| || |
Sbjct 328815 AGGTTCAGTGATTGGGACTGGTCGATGTATTGGCCGCGGTC-GCGTGCCATGTCGATCAA 328757
Query 212753 ATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCC 212812
| | ||| | || ||||||||||||| | | | || || ||||| ||||||| |||
Sbjct 328756 CTTGCGCTGCGGGATCTCCCACACGGTCCGGTAAAGCTCCTTTAGGTCATCTGGGATGCC 328697
Query 212813 GGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872
| ||||| | | || || ||| | | | | |||||| | ||| |||||
Sbjct 328696 GTCAATGTTGAGGATCGAACCATTGTAAGAGATGATTTCGTTGCGCATTTGCTCATTCCA 328637
Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932
||||| | | ||| | |||| |||| ||| || | |||| || ||
Sbjct 328636 CAGGCCACGCGCGATGAGGTCCATGACGAGGTACTTGTTCACCACAGGGAACTCGCCGCT 328577
Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992
||||| | | ||| | || || ||| |||| |||| | ||||||||| || ||
Sbjct 328576 CAGCACACGGCGGACGTATATATTCGAGGTGAAGGGTTCGAAACACTCGTTGTTGCCGAG 328517
Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCA---CTCC 213049
|||||| | ||| || || |||||||| | |||||| || ||| | | || |
Sbjct 328516 AATCTGCGAGGTGGACGCGGTTGGCATGGGGGACACCAGCAGTGAGTTGCGTATGCCTAC 328457
Query 213050 GTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTC 213109
||| | | | | || ||| ||||||||||| | ||| | | ||| |
Sbjct 328456 CTGCATGACCTTCT--CTTTGAGGCTG-GCCCAGTCCCAGC-----GACCGCTGTTCGGC 328405
Query 213110 CTTCACGTTC---CACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTA 213166
| | ||||| ||||| || ||||||| ||||| | ||| | |||||||||| | |
Sbjct 328404 CG-CGCGTTCTTCCACATATCGAACTGCAGAATGCCCTCGCTTGCCGGGCTGCCCTTGAA 328346
Query 213167 AGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTA 213226
| ||| || || | |||||| || ||||| |||| || | || ||| ||||
Sbjct 328345 GGTCTCGTACGGTCCCTCCTCCTTTGCGAGCTCCATCGACGACTCGACCGCGGCGAAGTA 328286
Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCAT 213286
|||||| || || |||||| ||| | | || ||||| | || ||| ||||
Sbjct 328285 GATGGTCTCGAAGATCTCCGCGTTCACCCGCTGCGCCTCCGCCGAGACGAACGGCAGTCG 328226
Query 213287 CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346
|||| | || ||||| || ||||| || || | |||||||| | || | ||
Sbjct 328225 CATGAGGATAAAGGTGTCAGCGAGGCCCTGTACACCAAGACCGATGGGACGGTTGCGCAT 328166
Query 213347 GTTAGACTTGGAGCACTC-CTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGT 213405
||| | || || || ||| | ||||| |||||| ||| || | ||| ||||
Sbjct 328165 GTT-GCTGCGGCGCGCTGTCTCGACTGGGTAGTAGTTGCGGTCAATAACACGGTTTAGGT 328107
Query 213406 TGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACG---TAGCCCC 213462
|||| ||| | || || || | || || ||| |||||| || | |
Sbjct 328106 TGCGCGTGATCTGCTTCGTCACGGCGTAGAGAAGCTGGTGGTTGAACTCGCGCTTTTCAA 328047
Query 213463 CGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAG 213522
|||| || || ||||| |||||| ||| |||||||| |||||| ||||| |
Sbjct 328046 CGTCG---ACGAAGCGCGGCAGCGCGATGGAGGCGAGGTTGCATACGGCCGTCTCCTCCG 327990
Query 213523 AGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCT 213582
|||||||| | || || ||||||||||| ||| ||| || || |||||||
Sbjct 327989 GCGACGTGTACTCGACAATTTCAGTGCACAGGTTCGAGCACTTGATCGTCCCAAGGTTCT 327930
Query 213583 GGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTA 213642
||||||||||| |||| | ||||||||| || ||| | || || ||||| |
Sbjct 327929 TCTGGTTTGACTTGCTGTTGCATGCATCCTTGTACAGGATGAACGGCCCGCCCGTCTCGA 327870
Query 213643 GCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTG-GCCTTGACCACCCGCCTGACAG 213699
||| ||| |||| || ||| ||| | | |||| |||| || | | |||||
Sbjct 327869 TCTGAGACTCCAGGAT--GGCAAACCACACCT-CCTGCGCCTGGATCGTCT---TGACAC 327816
Query 213700 CTCCGGGCGTA-GCCTCGTACTGTTCGTAGAGCTCGTTGAATTCGTGGCCC---CAGACC 213755
| | | | | |||||||| | ||||||||| | ||| | | ||| ||| |
Sbjct 327815 CGC-GTCCTTCCGCCTCGTAGCGCTCGTAGAGCCGCTCGAACGCCTCGCCATGGCAGTCG 327757
Query 213756 CTGTCCAGTCCCGGACAGGA-TGCGGGACACATGAGGCTCCAGTCCCCGTCATCTCTGAC 213814
||| || ||||| || | | ||| | ||| || |||| ||| ||| | ||||
Sbjct 327756 CTG---AGGCCCGGGCACGTGTTAGGGTC-CATCAGCGTCCACCGCCCCTCACTTTTGAC 327701
Query 213815 TCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCTGGTCCTCCTCTC 213874
| || |||||||| |||||||| ||||| |||| ||| ||||| | || | | ||
Sbjct 327700 ACGCTTCATGAACAAGTCCGGGATCCACAACGCGTAGAAGAGGTCACGGGCGCGCTGGTC 327641
Query 213875 GTCCACTCCAGAGTTTTTGCGC---AGATCTAGAAAGTCAAAGATGTCCGCGTGCCACGG 213931
||| ||| | ||| |||| || || || |||||| || || ||||| ||
Sbjct 327640 ATCCTTTCCTGTGTT---GCGCTTCAGCAACAGGAAACCAAAGACATCGGCATGCCAGGG 327584
Query 213932 CTCCATGTAGATGGCAAAGGCGCCCGGCCTCTT---GCCGCCCTGGTCCACCAGCCTGGC 213988
||| | |||| ||| ||||||||| | ||| |||||||||||| || | |||
Sbjct 327583 CTCGAGATAGACGGCGAAGGCGCCCTTGCGCTTACCGCCGCCCTGGTCTACGTAGCGGGC 327524
Query 213989 CACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTTGGTTCCCGC 214048
||||||||| |||||| | ||||| || ||||| ||| ||||||||||| ||
Sbjct 327523 AGTGTTGTTGAAGACGCGCAGCATTGGTACGAGTCCGTTCGACGTGCCGTTGGTTCCAGC 327464
Query 214049 TATATACGAGCCGGAGGCCCTCAGGT--TGCTCATGGAGAGCCCTATGCCACCGGCGTAC 214106
|| || ||||| ||| | | || ||| |||| ||| || || || ||||| |
Sbjct 327463 AATGTAGCTGCCGGCGGCGCGGATGTTGTGCACATGCAGA--CCAATACCGCCGGCCGCC 327406
Query 214107 TTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTCATC 214162
||| ||||| |||||| | ||| || || ||||||| | |||||||| ||
Sbjct 327405 TTGCTGATCACGGCGCACTCCTTCAGCGTATCGTAGATGCCGTCGATGCTGTCGTC 327350
>seq17
Length=659812
Score = 147 bits (162), Expect = 4e-30
Identities = 530/817 (65%), Gaps = 13/817 (2%)
Strand=Plus/Plus
Query 47839 CTGGTAGTCCCCCACTCTATTCTCAAAGAAGTTTGTCTTCCCCTCCAACGAGATGTTCTC 47898
|||||| || ||||| | |||||||||||||| || || |||| || |||||| ||||
Sbjct 494677 CTGGTACTCGCCCACCTTCTTCTCAAAGAAGTTCGTTTTGCCCTGCAGCGAGATCATCTC 494736
Query 47899 CATGAAGAGGAAGGGGTTGGGTGTGTTATACACCCGTGTCAGGCCCATCTGTTCCAGCAG 47958
||||||| ||||| | | | ||| || | | ||||| | | |||||
Sbjct 494737 CATGAAGTCAAAGGGCTGAGTCGCGTTGTAGTGCTTCTCCTCGCCCAGCGACACAAGCAG 494796
Query 47959 GTGATCCGCGACGTACTCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGA 48018
| ||||||||| |||| ||||| | | ||| || | |||||||| || ||
Sbjct 494797 CCGGTCCGCGACGAACTCAATGTACTGCGCCATCAGCTCGGCATTCATGCCAATCAGCCG 494856
Query 48019 CACGGGCAAAGCCTTTGTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTG 48078
|| || | || | || ||||| || || | ||| || ||| | | ||||
Sbjct 494857 CATCGGAAGCGCGTCGCAGATGAACTCGCGTTCGATGTTCACCGCATCCACAATGATCTC 494916
Query 48079 CTTAACGCGGGACTCT-GAGG--GTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGC 48135
| ||||| ||| | || |||||| | |||| | || |||| || ||
Sbjct 494917 CAGCACGCG---CTCGCGCGGCAGTTTGTGCTTGATGTGCGAGTTGTACAGCAGACACGC 494973
Query 48136 AAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGG 48195
|||||| |||| | ||| ||||| || ||||||| ||||| ||| | || ||
Sbjct 494974 GAAGTCCGTGTGTAGGCCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCAACCCCGG 495033
Query 48196 CATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCC 48255
||| | || | || || |||||||| | || ||| || || || |||||||||||
Sbjct 495034 CATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAAGGATCCGGAAAAGAAGATGCC 495093
Query 48256 CTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCA 48315
||||||||| || || || | |||| ||| | | ||| || || || | |||||
Sbjct 495094 CTCCACTGCGGCAAAGCCGATCAGCCGCTC-CTGGAAG-CTCGCGCTGCTCCCA-ATCCA 495150
Query 48316 GGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAG 48375
| ||||| || |||||||||| ||||||||| ||||||| || || | | ||
Sbjct 495151 CCGCACGGCCCACTCCGCCTTCTTCTGGATGCATGGGATCGTCTGGATCGCGTGCAGCAG 495210
Query 48376 CTTCTTGCACTCACCT-GC-GTCCGCAACATAGGTAGTGAGCAGCTTTGCGTACATCTCA 48433
| | || || ||| || ||| | | || || || ||| | ||| ||||
Sbjct 495211 CCGC-AGC-TTCTCCTCGCTGTCTGTGATGTACGTGTCCAGTAGCACAGAGTATGTCTCT 495268
Query 48434 GAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAACACCTGC 48493
||||| | ||||| || | |||||| |||||||| || | ||||| ||||| |
Sbjct 495269 GAGTGGATGTTCTCCATCATCAGCTGGAATCCGTAGAACGCGCGCGCCTCCGGCACCTTC 495328
Query 48494 ACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCAGCAAAG 48553
|| || | ||| | || |||||||| ||| || || || | || |||
Sbjct 495329 ACGTCGCTCATGAAACGCTGGGCAAGATTCTCGACGACGATGCCGTCGCTCCCGGCGAAG 495388
Query 48554 AAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCATTCCAGCCCTGT 48613
|||||||| || || || | || || || || || | | || || |||| |||
Sbjct 495389 AAGGCAAGCACGTGCTTGATAAAGTGCCGTTCCCCGTCGTTCAGCGCCACCCAGTCCTTC 495448
Query 48614 ACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGA 48650
| ||| ||||||||||| | || || || |||||||
Sbjct 495449 ATGTCGTTGCCCAGGTCGATCTCCTCTACCGTCCAGA 495485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 931532369166080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |