Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq23 158 2e-33 seq17 145 1e-29 >seq23 Length=1180511 Score = 158 bits (174), Expect = 2e-33 Identities = 694/1084 (64%), Gaps = 37/1084 (3%) Strand=Plus/Minus Query 221423 GCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTTGAGTCTCTTGGCCTCGGGAGAAGTG 221482 || ||| |||||||||||| |||||| | ||| | | || ||||| | || | Sbjct 328296 GCGGCGAAGTAGATGGTCTCGAAGATCTCCGCGTTCACCCGCTGCGCCTCCGCCGAGACG 328237 Query 221483 AAGGGCATACGCAGCATCTGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCGATGGGC 221542 || |||| |||| | |||| ||| || || |||||||| || | ||||||||| Sbjct 328236 AACGGCAGTCGCATGAGGATAAAGGTGTCAGCGAGGCCCTGTACACCAAGACCGATGGGA 328177 Query 221543 CTGTGTCTCCTGTTGGAAGCGGC-CGCT-TCTGGCACGGGATAAAAGTTGACGTCGATCA 221600 | || | | ||||| ||||| |||| ||| | || || || ||||| ||| || | Sbjct 328176 CGGTTGCGCATGTTGCT-GCGGCGCGCTGTCTCG-ACTGGGTAGTAGTTGCGGTCAATAA 328119 Query 221601 GATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGGTGATTGAACA 221660 | ||| ||||| | ||||| || ||| || || |||||| |||||| Sbjct 328118 CACGGTTTAGGTTGCGCGTGATCTGCTTCGTCACGGCGTAGAGAAGCTGGTGGTTGAACT 328059 Query 221661 CCAACTCGCCGCCGTCGTGGAGGGGTTCCACAAAAGCGTTTAGGGCAACGCTGGCCAGGT 221720 | || | ||||| || | | || | || | | ||| |||| Sbjct 328058 CGCGCTTTTCAACGTCGACGAAGCGCGGCA------------GCGCGATGGAGGCGAGGT 328011 Query 221721 TACACACGGCCACCTCGTCCTTGTTGGTATACTGTATGATCTCTGTACAGAGGTTGCTGC 221780 | || |||||| ||| ||| || |||| | || || || || ||||| || Sbjct 328010 TGCATACGGCCGTCTCCTCCGGCGACGTGTACTCGACAATTTCAGTGCACAGGTTCGAGC 327951 Query 221781 ACTTGATGGTCCCCAGGTGATTGTGATTAGACTTGCGATTGGCAGCGTCCTTGTAGAGCA 221840 ||||||| ||||| |||| || || || ||||||| ||| || |||||||| || | Sbjct 327950 ACTTGATCGTCCCAAGGTTCTTCTGGTTTGACTTGCTGTTGCATGCATCCTTGTACAGGA 327891 Query 221841 TAAAGGGACCGCCAGTCTCCAGCTGAGCCACCAGAATCTTGTCCCAGAGTTCTCTGGCGC 221900 | || || ||||| ||||| | ||||| | |||| || ||| | || ||| ||| Sbjct 327890 TGAACGGCCCGCCCGTCTCGATCTGAGACTCCAGGATGGCAAACCACACCTC-CTG-CGC 327833 Query 221901 TCACCGTCCTCTTGACTGCAC---CCTCGGTCTTTTCATACCCGGTATAGAGCATGTCAA 221957 | || ||||||| | | | || | || | | || |||||| || | Sbjct 327832 -CTGGATCGTCTTGACACCGCGTCCTTCCGCCTCGTAGCGCTCG---TAGAGCCGCTCGA 327777 Query 221958 ACTTTTCACCGTACGCCTCGTCCAGGCCTGGACACCTGGCGGGACACATCAGACTCCAGT 222017 || || || | ||| ||||| || ||| || || |||||| |||| Sbjct 327776 ACGCCTCGCCATGGCAGTCGCTGAGGCCCGGGCACGTGTTAGGGTCCATCAGCGTCCACC 327717 Query 222018 GCTTGTTGTCTTTGACCCTCTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGAT 222077 || | |||||| | || |||||| | |||||||||||||| ||| | ||||| | Sbjct 327716 GCCCCTCACTTTTGACACGCTTCATGAACAAGTCCGGGATCCACAACGCGTAGAAGAGGT 327657 Query 222078 CTCTGGTCCGCTGCTCCTCCACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGT 222137 | | || ||||| || ||| || |||| | |||| || || |||| | | Sbjct 327656 CACGGGCGCGCTGGTCATCCTTTCCTGTGTTGCGCTTCAGCAACAGGAAACCAAAGACAT 327597 Query 222138 CAGCGTGCCACGGCTCCAGATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGAT 222197 | || ||||| ||||| ||||||||||| | ||||| ||||| ||| ||||| | Sbjct 327596 CGGCATGCCAGGGCTCGAGATAGACGGCGAAGGCGCCCTTGCGCTTACCGCCGCCCTGGT 327537 Query 222198 CCACCATCCTCTCCAGAG-CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGATCGA 222256 | | | | ||| | |||||||| ||| || | ||||| |||||||| || Sbjct 327536 CTA-CGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCATTGGTACGAGTCCGTTCGACGTG 327478 Query 222257 CCGTTGGTGCCCTTAATGTACGCACCGCCGGCCCTCAGGTT----ACTGGCAGACATGCC 222312 |||||||| || |||||| ||| |||| | | ||| || ||||| || Sbjct 327477 CCGTTGGTTCCAGCAATGTAGCTGCCGGCGGCGCGGATGTTGTGCACATGCAGA----CC 327422 Query 222313 GATACCACCGGCGTGTTTCGAGATCATGGCGCAGCTCTTGAGAGTGTCCATGATGCCCTC 222372 ||||| ||||| || ||||| |||||| ||| || || || |||||| || Sbjct 327421 AATACCGCCGGCCGCCTTGCTGATCACGGCGCACTCCTTCAGCGTATCGTAGATGCCGTC 327362 Query 222373 CATAGAGTCCTCCTT-GACGTTCAGCAGAAAACAAGACGACATCTGAGATTTGGTGGAAC 222431 || ||| ||||| |||| || ||| || || || ||| || | || | || | Sbjct 327361 GATGCTGTCGTCCTTCGACG-CCACCAGGAAGCACGAGCTCATTTGCGGCTTCGGGGTGC 327303 Query 222432 AGGCGTTAAACAGCGTGGGACTGGCGTGTGTAAAGTAGCCCCTAGACATCAGATCGTACG 222491 ||||| || || || ||| | ||||| || || ||||| | |||||||||| ||||| Sbjct 327302 CAGCGTTGAAGAGGGTTGGAGTAGCGTGGGTGAAAAAGCCCATCGACATCAGATTGTACG 327243 Query 222492 TCTC 222495 |||| Sbjct 327242 TCTC 327239 Score = 84.2 bits (92), Expect = 4e-11 Identities = 109/151 (72%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 221100 CCTTGACCATGTGCTTGTTCACCACTTGGAAATCTCCCGAGAGCACCCTCCTCTGGTACA 221159 || |||| | || |||||||||||| |||| || || ||||| | | ||| | Sbjct 328616 CCATGACGAGGTACTTGTTCACCACAGGGAACTCGCCGCTCAGCACACGGCGGACGTATA 328557 Query 221160 GGTTAGAAGTGAACGGTTCGATGCTCTCGTTGTTGCCCAGGATCTGAGCCGTGCTGGCGG 221219 || || ||||| ||||||| | |||||||||||| || ||||| | ||| |||| Sbjct 328556 TATTCGAGGTGAAGGGTTCGAAACACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGG 328497 Query 221220 TGGGCATGGGTGCCACCAGCAGACTGTTGCG 221250 | |||||||| | ||||||||| |||||| Sbjct 328496 TTGGCATGGGGGACACCAGCAGTGAGTTGCG 328466 >seq17 Length=659812 Score = 145 bits (160), Expect = 1e-29 Identities = 380/571 (67%), Gaps = 9/571 (2%) Strand=Plus/Minus Query 25474 GATATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGAT 25533 ||||| ||| | ||||||| || | | || | |||||| | || ||||| || Sbjct 495522 GATATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGGTAGAGGAGATCGAC 495463 Query 25534 CTGGCCAAGGACATGGACGGCTGGTACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 |||| ||| |||||| | | |||| || || | | | || | ||| ||| ||||| Sbjct 495462 CTGGGCAACGACATGAAGGACTGGGTGGCGCTGAACGACGGGGAACGGCACTTTATCAAG 495403 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 ||||| | || ||||| || | || || || || ||||||||| | || | Sbjct 495402 CACGTGCTTGCCTTCTTCGCCGGGAGCGACGGCATCGTCGTCGAGAATCTTGCCCAGCGT 495343 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGC-CAAGTGTTTCTACGGTTTCCAGATGGCCAT 25712 |||| || || ||| || |||||| | | ||| |||||| |||||| || || Sbjct 495342 TTCATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGTT-CTACGGATTCCAGCTGATGAT 495284 Query 25713 CGAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGC 25772 || || | ||||| ||| || | ||| ||| |||||||| |||||| || Sbjct 495283 GGAGAACATCCACTCAGAGACATACTCTGTGCTACTGGACACGTACATCACAGACAGCGA 495224 Query 25773 CGAGAGAGAT-CGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGC 25831 |||| || | |||||| | || ||| || || || ||||| ||| ||||||| Sbjct 495223 GGAGA-AGCTGCGGCTGCTGCACGCGATCCAGACGATCCCATGCATCCAGAAGAAGGCGG 495165 Query 25832 GGTGGGCCATGAAGTGGATCAACAGCCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCT 25891 ||||||| || |||||| ||| ||||| | || ||||||||| | | || Sbjct 495164 AGTGGGCCGTGCGGTGGATTGGGAGC---AGCGCGAGCTTCCAGGAGCGGCTGATCGGCT 495108 Query 25892 TTGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTT-TGCGGCCATCTTCTGGCTCAAG 25950 |||| || |||||||||||||| || ||| || || |||| | | |||||||| ||| Sbjct 495107 TTGCCGCAGTGGAGGGCATCTTCTTTTCCGGATCCTTCTGCGCGC-TGTTCTGGCTGAAG 495049 Query 25951 CAGAAGGGGACCATGCCCGGGCTGTACTTTTCCAACGAGCTCATCAGCAGGGACGAGGGT 26010 || || ||||| ||| || || ||||||||||||| | |||||||| Sbjct 495048 AAGCGCGGTCTGATGCCGGGGTTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGC 494989 Query 26011 CTCCACAGAGATTTTGCCTGCCTGCTCTACA 26041 || |||| || || || || ||||| |||| Sbjct 494988 CTACACACGGACTTCGCGTGTCTGCTGTACA 494958 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928844370409280