Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq23 107 2e-18 >seq23 Length=1180511 Score = 107 bits (118), Expect = 2e-18 Identities = 550/866 (64%), Gaps = 21/866 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| | ||||| ||||| ||||| | ||||||||||| ||| | | || Sbjct 327176 CCTCAGCAGATGTTTATGCGTGTCGCCCTTGGCATCCACGGCAGAGATCTCAACAACGTG 327235 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 ||||| ||| | |||||| || | |||| ||||| || |||||||||||| Sbjct 327236 CGTGAGACGTACAATCTGATGTCGATGGGCTTTTTCACCCACGCTACTCCAACCCTCTTC 327295 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || ||||| || || | ||||| ||| | |||||||| | || ||||| ||| Sbjct 327296 AACGCTGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTCCTGGTGGCGTCGAAGGACGAC 327355 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 ||| |||| ||||| | || || | |||||| || ||| ||| ||| || Sbjct 327356 AGCATCGACGGCATCTACGATACGCTGAAGGAGTGCGCCGTGATCAGCAAGGCGGCCGGC 327415 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAA-ATCTCGTATTCGGGGGACAAA 75510 |||||||| |||| | || | | | ||| | || ||| || || || Sbjct 327416 GGTATTGGTCTGCATGTGCACAACATCCGCGCCGCCGGCAGCTAC-ATTGCTGGAACCAA 327474 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | || | | |||||||| ||||| || ||| ||| || ||||| || Sbjct 327475 CGGCACGTCGAACGGACTCGTACCAATGCTGCGCGTCTTCAACAACACTGCCCGCTACGT 327534 Query 75571 AAATCAAGCGGGGCGT---CGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGC 75627 | | || | || || |||||||| || |||| ||||| | || || |||||||| Sbjct 327535 AGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCGTCTATCTCGAGCCCTGGCATGC 327594 Query 75628 CGATATCATGGAGTTCCTTGAGTTAC-GA--CTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 |||| || | | ||||| ||| | || | |||| ||| | || || || Sbjct 327595 CGATGTCTTTGGTTTCCT---GTTGCTGAAGCGCAACACAGGAAAGGATGACCAGCGCGC 327651 Query 75685 TAGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744 | || ||||| | | ||||||| || ||| | ||||||||||| || | | Sbjct 327652 CCGTGACCTCTTCTACGCGTTGTGGATCCCGGACTTGTTCATGAAGCGTGTCAAAAGTGA 327711 Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGAC-GCGGTGGGTG 75803 || | ||| | || | || ||| | || || ||| |||| || ||| | Sbjct 327712 GGGGCGGTGGACGCTGATGGACCCTAACACGTGCCCGGGCCTCAGCGACTGCCATGGC-G 327770 Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGC---CAATGCGACTG 75860 ||| ||| || |||||| || || | ||| || | | ||| ||| Sbjct 327771 AGGCGTTCGAGCGGCTCTACGAGCGCTACGAGGCGGAAGGACGCGGTGTCAAGACGAT-- 327828 Query 75861 TACCAGCCGCCG-ATGTTTGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCA 75919 |||| ||| | | || ||| || || || | || |||| ||||| || || Sbjct 327829 --CCAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCTCAGATCGAGACGGGCGGGCCG 327886 Query 75920 TATATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATC 75979 | || || ||||||||||| || |||| ||| ||||| ||||| | || || ||| Sbjct 327887 TTCATCCTGTACAAGGATGCATGCAACAGCAAGTCAAACCAGAAGAACCTTGGGACGATC 327946 Query 75980 AAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTT 76039 ||| |||| || || ||||| |||||| | |||||||| ||| |||||||| || Sbjct 327947 AAGTGCTCGAACCTGTGCACTGAAATTGTCGAGTACACGTCGCCGGAGGAGACGGCCGTA 328006 Query 76040 TGCAATTTGGCATCAATCGCCCTTCC 76065 ||||| | || || ||||| || || Sbjct 328007 TGCAACCTCGCCTCCATCGCGCTGCC 328032 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569324086560