Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq21 206 3e-48 seq23 156 6e-33 >seq21 Length=1015393 Score = 206 bits (228), Expect = 3e-48 Identities = 465/693 (67%), Gaps = 8/693 (1%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| |||| || || ||||| || || || || | | || || | Sbjct 399397 GCGATCGGCATCGACCTAGGCACGACATACTCGTGCGTCGGCGTCTTCAAGAACGAACAG 399456 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || ||||| | || ||||| || ||||| ||||| || || || || ||||| || Sbjct 399457 GTGGAAATTATTGCCAACGACCAGGGCAACCGCACAACGCCGTCCTATGTGGCCTTCACG 399516 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || || | || ||||||||||| || ||| || |||||||| | ||| Sbjct 399517 GAGACGGAGCGCCTGATCGGCGATGCCGCAAAGAACCAGGTGGCGATGAACCCAAGCAAC 399576 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || |||||||||||||| | || || ||||||| ||| | | || | Sbjct 399577 ACGGTGTTTGACGCGAAGCGCATGATCGGCCGCAAGTACGACGATCCCGACCTTCAGTCC 399636 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | | ||| || ||| || || ||||| | || | Sbjct 399637 GACATGAAGCACTGGCCCT-TCAAGGTGA--CCGTCAAGGATGGCAAGCCCGTCATCGAG 399693 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 || || | ||| || || || ||| || || ||||| || |||||||| || Sbjct 399694 GTCGAGTATCAGGGCCAGTCCAAGATGTTTTTCCCGGAGGAAATCTCTGCTATGGTGCTG 399753 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 |||||||||||||| |||||| | | | | || | || ||||| | || ||| | Sbjct 399754 CAGAAGATGAAGGAGACGGCGGAAGCCTACCTCGGCACGACCGTGAAGAACGCCGTTATA 399813 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||||| || || || || ||||| || ||||| || | ||||| Sbjct 399814 ACCGTCCCGGCGTACTTCAACGACTCGCAGCGTCAGGCAACGAAGGATGCCGGGGCTATC 399873 Query 195779 GCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGG 195837 || || || || ||| || | || ||||| || || || || || || || || || || Sbjct 399874 GCTGGCCTCAA-TGTGCTGCGCATCATCAACGAGCCGACCGCCGCCGCTATCGCGTACGG 399932 Query 195838 TCTGGA---CAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGG 195894 |||| |||| | || | | ||| ||||| || |||||||||| || || || || Sbjct 399933 CATGGACCGCAAGGAAGAGAAGGGAGAGAAAAACGTGCTGATCTTTGACCTTGGCGGCGG 399992 Query 195895 TACGTTTGATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGC 195954 ||||| ||||| | || || | || || || | ||||| || || || || || Sbjct 399993 CACGTTCGATGTGACGCTGCTGACGATCGAGTCCGGCGTGTTCGAGGTGAAAGCAACCGC 400052 Query 195955 TGGTGATACTCATCTAGGTGGTGAAGATTTCGA 195987 ||||| ||||| || || || || || || || Sbjct 400053 GGGTGACACTCACCTCGGCGGCGAGGACTTTGA 400085 >seq23 Length=1180511 Score = 156 bits (172), Expect = 6e-33 Identities = 333/492 (68%), Gaps = 8/492 (2%) Strand=Plus/Minus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || ||||| ||||| | || || || ||||| || || || || ||||| || || || Sbjct 1101106 GCCATTGGCATCGACCTGGGCACGACGTACTCGTGCGTGGGCGTGTGGCAGAACGAGCGC 1101047 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || ||||| ||| |||| ||||| || ||||| || || || ||||||||||| || || Sbjct 1101046 GTGGAGATCATCGCGAACGACCAGGGTAACCGCACGACGCCGTCGTACGTTGCGTTCACG 1100987 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || || || || | || |||||||| || || ||| || |||||||| ||| Sbjct 1100986 GACTCGGAGCGCCTGATCGGCGATGCCGCGAAGAACCAGGTGGCGATGAACCCGCACAAC 1100927 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || || ||||||||||| || ||||| ||||||| || | || || | Sbjct 1100926 ACGGTGTTCGACGCGAAGCGCCTGATTGGCCGCAAGTACGGCGACCCGGTGGTGCAGGCG 1100867 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTG-GCTGATAAGCCTATGATT-- 195595 || || ||| ||||| | | | ||| || || | | | || ||||| ||||| Sbjct 1100866 GACATGAAGCACTGGCCCT-TCAAGGTGAAGACGAAGGGCGAAGACAAGCCCGTGATTTC 1100808 Query 195596 AATGTTGAATTTC-ACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGT 195654 || | | | | ||| ||||||| || | || || || || || ||||| Sbjct 1100807 GGTGCAGTACTGCAACGAGGAGAAGA---TCTTCACGCCGGAGGAGATCAGCTCGATGGT 1100751 Query 195655 GTTGATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGT 195714 | || | |||||||||||||| || || | | | |||| || ||||| | || || Sbjct 1100750 GCTGCTGAAGATGAAGGAGACGGCAGAGGCGTACCTGGGCAAGCAGGTGAAGAAGGCTGT 1100691 Query 195715 TGTGACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGC 195774 ||||| || || || ||||||| || || || || |||||||| |||||||| | | Sbjct 1100690 GGTGACGGTGCCGGCCTACTTCAACGACTCGCAGCGCCAGGCGACGAAGGACGCCGGCAC 1100631 Query 195775 TATTGCGGGTCT 195786 ||||| || || Sbjct 1100630 GATTGCTGGCCT 1100619 Score = 118 bits (130), Expect = 1e-21 Identities = 222/327 (68%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||| | || | ||| | || | | ||||| | || || ||||| Sbjct 455546 AAGATGAAGGAGATCTCCGAGACATTCCTCGGCGAGAAGGTGAAGAACGCTGTGGTGACC 455605 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| |||| | || || ||||| ||||||||| ||| || || Sbjct 455606 GTGCCAGCGTACTTCAATGATGCGCAGCGCCAGGCAACAAAGGACTCTGGCAAGATCGCC 455665 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| | | || ||||| || || || |||||||| || || || || || Sbjct 455666 GGCCTTAACGTGGTCCGCATCATCAACGAGCCGACGGCGGCTGCCATCGCGTACGGCCT- 455724 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||||||| | || || ||| | | |||| || ||||||||||| |||||| Sbjct 455725 -----CAACAAGGCTGGGGAGAAGAATATCCTTGTCTTCGACCTCGGTGGTGGCACGTTT 455779 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||||| || | || | || || | ||| | ||||| || || || ||||| Sbjct 455780 GATGTGTCTTTGCTGACGATCGACGAGGGTTTCTTCGAGGTCGTCGCGACAAACGGTGAC 455839 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGAT 195988 || || || ||||||||||| |||||| Sbjct 455840 ACCCACCTTGGTGGTGAAGACTTCGAT 455866 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862095738640