Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq34 183 4e-41 >seq34 Length=527293 Score = 183 bits (202), Expect = 4e-41 Identities = 424/626 (68%), Gaps = 26/626 (4%) Strand=Plus/Minus Query 146884 GGGAAGG-GTCGGGGGTTC-CTGGCCAGCTGAATTTTCAGGGGCTCCACGTGGTTGAGGT 146941 ||||||| || || |||| || | ||||| | |||||| | || | ||||||| ||| Sbjct 366387 GGGAAGGCGTTCGGAGTTCGCTCG--AGCTGCACTTTCAGAGCATCGATGTGGTTGCGGT 366330 Query 146942 AGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCCCCCGGCTTAAGGCCGGTCACGTGGG 147001 |||| || ||||| || || |||||||| | || || ||| || || || | | | Sbjct 366329 AGACATGGGCGTCGCCGAGCGTGTGCACGAGTTCGCCAGGCCGCAGACCCGTGGCTTTTG 366270 Query 147002 CCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATGTTGAAGGGGACCCCCAGGCCCATGT 147061 ||| | | ||||||||||| |||| ||| |||||||||||||| || || ||||||| Sbjct 366269 CCATAAGGATGGTGAGCAGCGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGCCCCATGT 366210 Query 147062 CCCCCGACCTCTGGTACAGCTGGCACGAGAGCTC---CCCGTC---GGCCACGTAAAACT 147115 | | ||| | |||||||||| ||| || ||||| | |||| | |||||| |||| Sbjct 366209 CGCACGAGCGCTGGTACAGCATGCAGGACAGCTCCTTCGCGTCCGTGTTCACGTAGAACT 366150 Query 147116 G-GCACAGGATGTGGCACGGCGGCAGCGCCATGGCGGGCAGGTCCGCG---GGGTTCCAG 147171 | ||| || | ||| || ||||||| |||||| || |||| |||| ||||||||| Sbjct 366149 GAGCA-AGCAAGTGACAGGGCGGCAACGCCATCTCGTGCAG---CGCGCATGGGTTCCAG 366094 Query 147172 GCCGAGACCACCAGCCGCCTGCTCTCGGGGTTCCTCTTAA---TCTCTTCGATAACCCAC 147228 || | | || || || | | | |||||| ||| | |||| |||| | Sbjct 366093 GCAGTTAACAGGAGGCGGCGGTCGTTTGGGTTCACCTTGATGGTCTCCACGAT---GGAT 366037 Query 147229 CTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTCCCGCAGTCCACGTACCTGGCCCCA 147288 | | ||||||||| || | ||| |||| || | | | | || |||| || || Sbjct 366036 TTGATCTGGTCCACCCCTTCGCCATCGTAATTCGCCTCAAACCCCTTGTACTGTGCTCCG 365977 Query 147289 AAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGGTCGCCGGGCTTTCTGTGCGAGAAG 147348 ||||| | ||||||||| ||||| || || || || || ||| | || ||| Sbjct 365976 AAGTGGCGCCACTGGAATCCGTAGACAGGGCCGAGATCCATCTCCTTATTCGCCGTCAAG 365917 Query 147349 CC-CGCCCGCTTGAGAAACTCGGGGGACCCGTGGGCGTCCCAGATGCCCACTCCCTTGGC 147407 || || | | | |||||||||| | || |||| | ||||||||| | ||||| | Sbjct 365916 CCGCGGCTG-TCGAGAAACTCGCGCGAGCCGTTACCATCCCAGATGTGAATGTCCTTGTC 365858 Query 147408 GGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAACCAGAGCAGCTCCTCCAAAACCCC 147467 | ||| || | || || ||| || | |||||| ||||||||||| | || || Sbjct 365857 CGCCAGCAACTGGGCGTTTGTTTCGCCGCGCAGGAACCACAGCAGCTCCTCGCACACGCC 365798 Query 147468 CCTCCAAAAGACCCTCTTGGTGGTCA 147493 | ||| || || | ||| || |||| Sbjct 365797 GCGCCAGAAAACACGCTTCGTTGTCA 365772 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583487730136800