Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq23 138 1e-27 >seq23 Length=1180511 Score = 138 bits (152), Expect = 1e-27 Identities = 556/860 (65%), Gaps = 27/860 (3%) Strand=Plus/Minus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || || ||||| || || || || || || | ||||| ||| |||||||| | | Sbjct 328032 GGCAGCGCGATGGAGGCGAGGTTGCATACGGCCGTCTCCTCCGGCGACGTGTACTCGACA 327973 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 ||||| ||||||| ||| || | ||| || || || | |||||| || |||||||| || Sbjct 327972 ATTTCAGTGCACAGGTTCGAGCACTTGATCGTCCCAAGGTTCTTCTGGTTTGACTTGCTG 327913 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 || || ||||||||||| || ||| | ||| |||||||| | || |||| || || Sbjct 327912 TTGCATGCATCCTTGTACAGGATGAACGGCCCGCCCGTCTCGATCTGAGACTCCAGGATG 327853 Query 118884 GCCTTCCAGACAT-CGGCAGCTGGCACAGTGGCGTTGGCTCGCCCCTCTTCCTCGTACTT 118942 || ||| || | | || |||| | || | | || || || ||||||| Sbjct 327852 GCAAACCACACCTCCTGCGCCTGG-ATCGTCTTGACACCGCGTCCTTCCGCCTCGTAGCG 327794 Query 118943 TGTGTAGAGGGCTTCAAACTCTTCACCCACGGC---CTCTGAGAGCCCTGGTGCCTTATC 118999 |||||| || ||| | || ||| ||| | ||||| |||| || | | | Sbjct 327793 CTCGTAGAGCCGCTCGAACGCCTC-GCCATGGCAGTCGCTGAG-GCCC-GGGCACGTGTT 327737 Query 119000 TGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGAT 119059 ||| | || | ||| | || | | || ||||||||||| | ||| ||||| Sbjct 327736 AGGGTCCATCAGCGTCCACCGCCCCTCACTTTTGACACGCTTCATGAACAAGTCCGGGAT 327677 Query 119060 CCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCC--CCCTG-ATTGAGACG 119116 ||| | ||| ||||||| || || ||| || | |||||| |||| ||| | Sbjct 327676 CCACAACGCGTAGAAGAGGTCACG--GGCGCGC-TGGTCATCCTTTCCTGTGTTGCGCTT 327620 Query 119117 CAACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCC 119176 || | || || | | || ||| || ||||| || || || || || |||| | || Sbjct 327619 CAGCAACAGGAAACCAAAGACATCGGCATGCCAGGGCTCGAGATAGACGGCGAAGGCGCC 327560 Query 119177 CTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAAGCAT 119233 ||| || || || |||||| ||| || | |||||| ||| || || || ||||| Sbjct 327559 CTTGCGCTTACCGCCGCCCTGGTCTACGTAGCGGGCAGTGTTGTTGAAGACGCGCAGCAT 327500 Query 119234 TGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACT--TATTGGCTCTG 119291 ||| | || || | || ||| || || || ||| | || ||| | | Sbjct 327499 TGGTACGAGTCCGTTCGACGTGCCGTTGGTTCCAGCAAT--GTAGCTGCCGGCGGCGCGG 327442 Query 119292 ACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTG 119351 | | ||| | |||| ||||||||| || ||| ||| ||| ||||||||| | Sbjct 327441 ATGTTGTGCACATGCAGACCAATACCGCCGGCCGCCTTGCTGATCACGGCGCACTCCTTC 327382 Query 119352 AGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC---AGCTC 119408 || | ||||||| || ||||| ||| |||| || | ||||||| |||| Sbjct 327381 AGCGTATCGTAGATGCCGTCGATGCTGTCGTCCTTCGACGCCACCAGGAAGCACGAGCT- 327323 Query 119409 GACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAACATA 119468 |||||| ||| | || || |||||||||||||| ||||| || |||||| |||| | Sbjct 327322 --CATTTGCGGCTTCGGGGTGCCAGCGTTGAAGAGGGTTGGAGTAGCGTGGGTGAAAAAG 327265 Query 119469 CCTTGGGACATCTTGTCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCG 119528 || |||||| | ||| ||||| ||| | | ||| ||||| || || Sbjct 327264 CCCATCGACATCAGATTGTACGTCTCACGCACGTTGTTGAGATCTCTGCCGTGGATGCCA 327205 Query 119529 ATCGAGACCCGCATAAACAT 119548 | | ||| ||||||||||| Sbjct 327204 AGGGCGACACGCATAAACAT 327185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618434913973720