Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq17 98.7 1e-15 seq22 93.3 5e-14 >seq17 Length=659812 Score = 98.7 bits (108), Expect = 1e-15 Identities = 168/243 (69%), Gaps = 3/243 (1%) Strand=Plus/Minus Query 94702 GAGAAGAAGCAGCTCTTTGAAGCCATCCAAACAGTTCCGTGTATTCAAAAGAAAGCGGAT 94761 |||||| || ||| | | || ||||| || | || || || || ||||| ||||| Sbjct 495222 GAGAAGCTGCGGCTGCTGCACGCGATCCAGACGATCCCATGCATCCAGAAGAAGGCGGAG 495163 Query 94762 TGGGCTATGAAGTGGTTTGATACAAAGTCGCGTTCCTTTGCTGAGCGACTCTTCGCATTT 94821 ||||| || |||| ||| | | || | ||| ||||| || ||| ||| Sbjct 495162 TGGGCCGTGCGGTGGATTGGGAGCAGCGCGAG---CTTCCAGGAGCGGCTGATCGGCTTT 495106 Query 94822 GCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCTATTTATTGGCTCAAGAAG 94881 || || ||||| |||||||| || || ||||||||||| | | ||||| |||||| Sbjct 495105 GCCGCAGTGGAGGGCATCTTCTTTTCCGGATCCTTCTGCGCGCTGTTCTGGCTGAAGAAG 495046 Query 94882 CGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATCTCTCGTGACGAGGGACTC 94941 || ||||| ||||| || | ||| ||||||||| ||||| || |||||||| || Sbjct 495045 CGCGGTCTGATGCCGGGGTTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGCCTA 494986 Query 94942 CAC 94944 ||| Sbjct 494985 CAC 494983 >seq22 Length=1192232 Score = 93.3 bits (102), Expect = 5e-14 Identities = 105/141 (74%), Gaps = 0/141 (0%) Strand=Plus/Minus Query 94804 GAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGGTTCCTTCTGCGCT 94863 ||||| || ||| ||||| || ||||| |||||||| || || ||||||||||| Sbjct 920746 GAGCGGCTGATCGGCTTTGCCGCAGTGGAGGGCATCTTCTTTTCCGGATCCTTCTGCGCG 920687 Query 94864 ATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTCCAACGAGCTTATC 94923 | | ||||| |||||||| ||||| ||||| || | ||| ||||||||| ||| Sbjct 920686 CTGTTCTGGCTGAAGAAGCGCGGTCTGATGCCGGGGTTGACGTTCAGCAACGAGCTCATC 920627 Query 94924 TCTCGTGACGAGGGACTCCAC 94944 || || |||||||| || ||| Sbjct 920626 TCGCGCGACGAGGGCCTACAC 920606 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260530241880