Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq23 232 7e-56 seq8 98.7 1e-15 >seq23 Length=1180511 Score = 232 bits (256), Expect = 7e-56 Identities = 530/773 (69%), Gaps = 26/773 (3%) Strand=Plus/Plus Query 53179 GCCTCAGTATCTTTTCATGCGCGTCGCCTTGGGTATCCACGGTGACGA-CTACACG-CGT 53236 ||||||| | | || ||||| |||||| | || |||||||| || || || ||| Sbjct 327175 GCCTCAGCAGATGTTTATGCGTGTCGCCCTTGGCATCCACGGCAGAGATCTCAACAACGT 327234 Query 53237 GTCCGTGAGACGTACGACTTAATGAGCCAAAAGTACTTT-ACGCACGCCACGCCAACCCT 53295 | |||||||||||| | | ||| | | | ||| || ||||| || |||||||| Sbjct 327235 G--CGTGAGACGTACAATCTGATGT-CGATGGGCTTTTTCACCCACGCTACTCCAACCCT 327291 Query 53296 GTTCAACGCTGGTACGAATCACCCTCAGATGTCGAGCT---GCTTCCTGGTGGCGATGAA 53352 ||||||||||| || | || || ||| |||| |||||||||||||| ||| Sbjct 327292 CTTCAACGCTGGCACCCCGAAGCCGCAAATG---AGCTCGTGCTTCCTGGTGGCGTCGAA 327348 Query 53353 GGATGACTCGATCGACGGCATCTACGAGACGCTCAAGGAGTGTGCCCACATCTCCAAGTG 53412 ||| ||| ||||||||||||||||| ||||| |||||||| ||| ||| |||| Sbjct 327349 GGACGACAGCATCGACGGCATCTACGATACGCTGAAGGAGTGCGCCGTGATCAGCAAGGC 327408 Query 53413 GTCGGGTGGTATCGGTATCCAC-TGCTCGAACGTCCGTGCGAACGGCACACCAATCAAGG 53471 | | || ||||| ||| | || ||| | ||| |||| || ||||| || | Sbjct 327409 GGCCGGCGGTATTGGTCTGCATGTGCAC-AACATCCGCGCCGCCGGCAGCTACATTGCTG 327467 Query 53472 GGACGAACGGCGTCGCCGAT-GGAATCGTGCCTATGCTCCGCGTCTTCAACAACACGGCC 53530 | || |||||| || ||| ||| |||| || ||||| ||||||||||||||||| ||| Sbjct 327468 GAACCAACGGCA-CGTCGAACGGACTCGTACCAATGCTGCGCGTCTTCAACAACACTGCC 327526 Query 53531 CGGTACGTCAACCAGGGTGGTGGGAAGCGCAAGGGGTCGTTCGCCATCTACCTCGAGCCG 53590 || ||||| ||||||| || || ||||||||||| | |||||| |||| |||||||| Sbjct 327527 CGCTACGTAGACCAGGGCGGCGGTAAGCGCAAGGGCGCCTTCGCCGTCTATCTCGAGCCC 327586 Query 53591 TGGCACGCCGACATTATGGAGTTTCTCGAGCTGCGTCTGAATCAGGGTGACGAAGAGATG 53650 ||||| ||||| | | | || || |||| | || || | || || | Sbjct 327587 TGGCATGCCGATGTCTTTGGTTTCCTGTTGCTGAAGCGCAACACAGGAAAGGATGACCAG 327646 Query 53651 CGCTGCCGTGACCTGTT-TACAGCTCTGTGGATTCCGGACCTCTTCATGCAAAAGGTG-G 53708 ||| ||||||||| || ||| || ||||||| |||||| | |||||| || ||| Sbjct 327647 CGCGCCCGTGACCTCTTCTAC-GCGTTGTGGATCCCGGACTTGTTCATG--AAGCGTGTC 327703 Query 53709 AGAAG-GACGAGGAGTGGTACCTGATGTGCCCGAACGAGTGCCCCGGCCTCCAGGGTGT- 53766 | ||| || | | |||| |||||| ||| ||| |||||| ||||| ||| | | Sbjct 327704 AAAAGTGAGGGGCGGTGGACGCTGATGGACCCTAACACGTGCCCGGGCCT-CAGCGACTG 327762 Query 53767 CTACGGTGAGGAGTTTAACGAGATGTATCGGACG-TACGCAGTTCAGGGCCGCTACAAGA 53825 | | || |||| ||| | | | || || || |||| | | || ||| | Sbjct 327763 CCATGGCGAGGCGTTCGAGCGGCTCTA-CGAGCGCTACGAGGCGGAAGGACGCGGTGTCA 327821 Query 53826 AGAAGGTCAAGGCGCGTGAGGTATGGGATGCAATCCTCAAGAGCCAGGTGGAGACGGGAA 53885 ||| | || |||||| ||||| ||| ||| ||||| || ||| | |||||||| Sbjct 327822 AGACGATCCAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCTCAGATCGAGACGGGCG 327881 Query 53886 CGCCGTACATGTGCTACAAGGATTCGGTCAACGAGAAGAGCAACCAGAAGAAC 53938 ||||| ||| ||||||||| | |||| ||| |||||||||||| Sbjct 327882 GGCCGTTCATCCTGTACAAGGATGCATGCAACAGCAAGTCAAACCAGAAGAAC 327934 Score = 113 bits (124), Expect = 5e-20 Identities = 299/451 (66%), Gaps = 7/451 (2%) Strand=Plus/Plus Query 55478 GGCCTACGCAACTCCCTGCTCGTGGCGCCAATGCCAACCGCGTCGACGGCTCAGATCATG 55537 ||| |||||||||| ||||| ||| | || |||||||||||||| || | ||||| | Sbjct 328460 GGCATACGCAACTCACTGCTGGTGTCCCCCATGCCAACCGCGTCCACCTCGCAGATTCTC 328519 Query 55538 GGCAACAACGAGGCGTTCGAGCCGTACACGACCAACATCTACCTGCGCCGGACCCT-AGC 55596 |||||||||||| ||||| || | ||| | || || ||| | ||||| || ||| Sbjct 328520 GGCAACAACGAGTGTTTCGAACCCTTCACCTCGAATATATACGTCCGCCGTGTGCTGAGC 328579 Query 55597 AGGTGAGTTTGTCATGATCAACAAGCACCTCGTCAAGGACCTGCAGAAGATCAACAAGTG 55656 || ||||| || | |||||| ||||||||| |||||| | | ||| Sbjct 328580 -GGCGAGTTCCCTGTGGTGAACAAGTACCTCGTCATGGACCTCATCGCGCGTGGCCTGTG 328638 Query 55657 GAACCCGCAGATCAAGACGGATATTGTGCGGAACGGGGGGTCCGTCCAGAATCTGGAG-- 55714 ||| ||| || | || || | || || || ||| || | || Sbjct 328639 GAATGAGCAAATGCGCAACGAAATCATCTCTTACAATGGTTCGATCCTCAACATTGACGG 328698 Query 55715 -ATTCCTCTGCGTCTCAAGGAGATTTACCGGACGGTGTGGGAGATTCCACAGAAGAGTCT 55773 || || || |||||| |||||||||| ||||||||||| || ||| | | Sbjct 328699 CATCCCAGATGACCTAAAGGAGCTTTACCGGACCGTGTGGGAGATCCCGCAGCGCAAGTT 328758 Query 55774 GATTGACATGAGTGCTGATCGTGGTGCGTACATCGACCAGTCCCAGTCTCTGAACATCTT 55833 ||| |||||| || || || ||||||||||||||||| || |||||| |||| Sbjct 328759 GATCGACATGGCACGCGACCGCGGCCAATACATCGACCAGTCCCAATCACTGAACCTCTT 328818 Query 55834 CATGGAGA-ATCCTTCACTGGCCAAGTTGAGCTCGATGCACTTTTACGGGTGGAAGAAGG 55892 | ||| || | |||||| || | | || |||| ||| ||||| ||| || | Sbjct 328819 TCTTCAGAGCCCCACCTCTGGCC-AGATCACGTCCATGCTCTTCTACGGCTGGGAGGCTG 328877 Query 55893 GACTCAAGACGGGTATGTACTATCTGCGGAC 55923 |||| ||||| ||| | |||||||| || || Sbjct 328878 GACTGAAGACTGGTGTCTACTATCTACGCAC 328908 >seq8 Length=622354 Score = 98.7 bits (108), Expect = 1e-15 Identities = 110/147 (75%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 152079 TCCAAACTGTCCAGAGGGCTCGAGGAGGTTGAGGTTGTTGGCGCCCACGAAATTCTGAGC 152138 ||| ||||| || ||| |||| ||||||| ||||||| |||| ||| ||||| || Sbjct 506903 TCCGAACTGACCCTCCGGCACGAGCAGGTTGATGTTGTTGCCGCCAGTGAAGTTCTGTGC 506962 Query 152139 CAAATTCACAATCGTGCCCTGCAGACTCGCTTCACCGTGGTGATACGCCGTCTGCTCCGC 152198 || ||||| ||||| ||||||| | || ||||||||| |||||| | ||| | Sbjct 506963 CATCTTCACGATCGTCTCCTGCAGCGAGACCTCGCCGTGGTGAAACGCCGACGCCTCTGA 507022 Query 152199 GATGTATCCCGCCAACTGCGCCACCTT 152225 |||||| |||| || ||||||||||| Sbjct 507023 GATGTAGCCCGACAGTTGCGCCACCTT 507049 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547215746912600