Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq34 158 1e-33 >seq34 Length=527293 Score = 158 bits (174), Expect = 1e-33 Identities = 387/585 (66%), Gaps = 14/585 (2%) Strand=Plus/Plus Query 34223 CCGCTGCTGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTC 34282 ||||| |||| ||||| ||||| | |||| |||||| ||||||||||||||||||| Sbjct 365765 CCGCTCTTGACAACGAAGCGTGTTTTCTGGCGCGGCGTGTGCGAGGAGCTGCTGTGGTTC 365824 Query 34283 GTGAGGGGGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCT 34342 || | || | || ||| || || ||| || | || | | |||||||| | | Sbjct 365825 CTGCGCGGCGAAACAAACGCCCAGTTGCTGGCGGACAAGGACATTCACATCTGGGATGGT 365884 Query 34343 CACGGGTCTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTG 34402 |||| || || || ||||| |||| || || || | | ||||| || | Sbjct 365885 AACGGCTCGCGCGAGTTTCTCGACAGCCGCGGCTTGACGGCGAATAAGGAGATGGATCTC 365944 Query 34403 GGCCCGGTCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCG 34462 ||||| |||||||| ||||||||| | ||||| || || |||| |||| || ||| Sbjct 365945 GGCCCTGTCTACGGATTCCAGTGGCGCCACTTCGGAGCACAGTACAAGGGGTTTGAGGCG 366004 Query 34463 GACTATTCGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAAC 34522 | || || | || | ||||||| | | | | | | || ||| | ||| |||| Sbjct 366005 AATTACGATGGCGAAGGGGTGGACCAGATCAAATCCATCGTGGAGACCATCAAGGTGAAC 366064 Query 34523 CCTGATGACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCG 34582 || | ||| | | || || | || |||||||| | || | ||||||| Sbjct 366065 CCAAACGACCGCCGCCTCCTGTTAACTGCCTGGAACCCATGCGCGCTGCACGAGATGGCG 366124 Query 34583 CTCCCCCCGTGCCACACCCTCTGC-CAATTCTACGT---------CGCGAATGGGGAGCT 34632 | || || || ||| || ||| || |||||||| |||||| |||||| Sbjct 366125 TTGCCGCCCTGTCACTTGCT-TGCTCAGTTCTACGTGAACACGGACGCGAA---GGAGCT 366180 Query 34633 GTCCTGCCAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGC 34692 ||||||| ||| || || || ||| | ||||||||| | || || || |||||||| || Sbjct 366181 GTCCTGCATGCTGTACCAGCGCTCGTGCGACATGGGGCTCGGCGTCCCCTTCAACATCGC 366240 Query 34693 TAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTGGGGTTGGTTCCTGGGGAGCT 34752 ||||| |||||||| | | || || | | | ||| || ||||| || || Sbjct 366241 CTCCTACGCGCTGCTCACCATCCTTATGGCAAAAGCCACGGGTCTGCGGCCTGGCGAACT 366300 Query 34753 GGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCACATCGA 34797 ||||| ||| | || || || ||| |||||| ||||||||||| Sbjct 366301 CGTGCACACGCTCGGCGACGCCCATGTCTACCGCAACCACATCGA 366345 Score = 158 bits (174), Expect = 1e-33 Identities = 387/585 (66%), Gaps = 14/585 (2%) Strand=Plus/Minus Query 6548 TCGATGTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACC 6607 ||||||||||| |||||| ||| || || || | ||| ||||| || || ||||| | Sbjct 366345 TCGATGTGGTTGCGGTAGACATGGGCGTCGCCGAGCGTGTGCACGAGTTCGCCAGGCCGC 366286 Query 6608 AACCCCACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGC 6667 | ||| | | | || || | | |||||||| ||||| || |||||||| || Sbjct 366285 AGACCCGTGGCTTTTGCCATAAGGATGGTGAGCAGCGCGTAGGAGGCGATGTTGAAGGGG 366226 Query 6668 ACCCCTAACCCCATGTCTCCCGATCGTTGATAGAGCTGGCAGGACAGCTCCCCATTCGCG 6727 || || | ||||||||| | ||| || || || ||| ||||||||||||| |||||| Sbjct 366225 ACGCCGAGCCCCATGTCGCACGAGCGCTGGTACAGCATGCAGGACAGCTCC---TTCGCG 366169 Query 6728 ---------ACGTAGAATTG-GCAGAGGGTGTGGCACGGGGGGAGCGCCATCAGAGGGAG 6777 |||||||| || ||| || ||| || || || | ||||||| | || Sbjct 366168 TCCGTGTTCACGTAGAACTGAGCA-AGCAAGTGACAGGGCGGCAACGCCATCTCGTGCAG 366110 Query 6778 ATCCTTCGGGTTCCACGCGCACATCACGATCCTTCTGTCATCAGGGTTCCGCTTCAAGGT 6837 | |||||||| || | || || | | ||| | |||||| ||| | ||| Sbjct 366109 CGCGCATGGGTTCCAGGCAGTTAACAGGAGGCGGCGGTCGTTTGGGTTCACCTTGATGGT 366050 Query 6838 GTCGATCACGTACTGCAGCTGGTCCGCTCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCG 6897 || | | | | | | ||||||| | || | || || | ||| || |||| Sbjct 366049 CTCCACGATGGATTTGATCTGGTCCACCCCTTCGCCATCGTAATTCGCCTCAAACCCCTT 365990 Query 6898 ATACTCCGCCCCAAAGTGTCTCCACTGGAACCCGTAGACCGGGCCCAAGTCGCCCTCCTC 6957 |||| || || ||||| | ||||||||| |||||||| ||||| | || ||||| Sbjct 365989 GTACTGTGCTCCGAAGTGGCGCCACTGGAATCCGTAGACAGGGCCGAGATCCATCTCCTT 365930 Query 6958 CCGAGATGGGAACCCCCGCTTGTCCAGAAAGTCTCGAGACCCGTGAGCGTCCCAGATCTT 7017 | | || || || |||| ||||| || || || |||| | | |||||||| | Sbjct 365929 ATTCGCCGTCAAGCCGCGGCTGTCGAGAAACTCGCGCGAGCCGTTACCATCCCAGATGTG 365870 Query 7018 CACCCCCCGGGACGAGAGCTCCTTGGTGTTCGTGGCCCCCCTCACGAACCACAGCAGCTC 7077 | || | || ||| || || ||| || | || | || ||||||||||||||| Sbjct 365869 AATGTCCTTGTCCGCCAGCAACTGGGCGTTTGTTTCGCCGCGCAGGAACCACAGCAGCTC 365810 Query 7078 CTCGACCACGCCCTTCCAGTACACACGTTTCGTCGTCAGCAGCGG 7122 |||| |||||| |||| | ||||| ||||| |||| ||||| Sbjct 365809 CTCGCACACGCCGCGCCAGAAAACACGCTTCGTTGTCAAGAGCGG 365765 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262192678640