Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403675.1_202015-09-17] 37 sequences; 32,907,781 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq34 96.9 3e-15 seq27 93.3 3e-14 >seq34 Length=527293 Score = 96.9 bits (106), Expect = 3e-15 Identities = 155/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 29632 CTCGAGCTGAATCCTCAGCGGTTCCACGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGT 29691 ||||||||| | |||| | || | ||||| ||||||| || || || || || || Sbjct 366367 CTCGAGCTGCACTTTCAGAGCATCGATGTGGTTGCGGTAGACATGGGCGTCGCCGAGCGT 366308 Query 29692 GTGGACAAACTCTCCCGGTTCTAGCCCGGTGACGTGAGCCATCATGTACGTGAGGAGAGA 29751 ||| || | || || || || || ||| | | ||||| | | ||||| || | Sbjct 366307 GTGCACGAGTTCGCCAGGCCGCAGACCCGTGGCTTTTGCCATAAGGATGGTGAGCAGCGC 366248 Query 29752 GTAGCTGGCGATGTTAAAGGGCACCCCGAGCCCCATGTCCCCTGACCTCTGGTAGAGCTG 29811 |||| ||||||||| ||||| || |||||||||||||| | || | |||||| ||| Sbjct 366247 GTAGGAGGCGATGTTGAAGGGGACGCCGAGCCCCATGTCGCACGAGCGCTGGTACAGCAT 366188 Query 29812 GCACGAGAGCTC--TC-CGTC---GCTCACGTAAAACTGA 29845 ||| || ||||| || |||| | ||||||| |||||| Sbjct 366187 GCAGGACAGCTCCTTCGCGTCCGTGTTCACGTAGAACTGA 366148 >seq27 Length=1625307 Score = 93.3 bits (102), Expect = 3e-14 Identities = 111/146 (76%), Gaps = 6/146 (4%) Strand=Plus/Minus Query 53531 ATGGGCGACAAGTTT-GCATCCTTCACGGCGCAAAAGGGGACATGCGGAG--CGGTCCTG 53587 || |||||||| ||| ||| || |||||| |||||||| || ||| | || | Sbjct 72848 ATCGGCGACAAATTTTGCAGCCGGCACGGC-CAAAAGGGCACCAACGGCATTCAGTTTCG 72790 Query 53588 ACTCAGGAGGACATGCCCTTCGACAAGGACGGGGTGGTGCCCGACCTCATCATCAACCCC 53647 | ||||||||||||||||| | ||||| || ||||| ||||||||||||||||| Sbjct 72789 CC--AGGAGGACATGCCCTTCAATCGCGACGGCGTCGTGCCGGACCTCATCATCAACCCG 72732 Query 53648 CACGCCTTTCCCTCCAGGATGACGGT 53673 |||||| |||||||| | ||||| || Sbjct 72731 CACGCCATTCCCTCCCGCATGACAGT 72706 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406163016845782