Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq34 147 3e-30 >seq34 Length=534489 Score = 147 bits (162), Expect = 3e-30 Identities = 337/497 (68%), Gaps = 24/497 (5%) Strand=Plus/Minus Query 145776 GGTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTCCCCCGAGCG 145835 ||| ||||| | |||| ||| ||||||||||| || || ||||||||||| | |||||| Sbjct 370502 GGTGAGCAGCGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGCCCCATGTCGCACGAGCG 370443 Query 145836 CTGGTACAGCTGGCAGGAGAGCTC---CCCGCCCG---CCACGTAGAACTG-GCACAGGA 145888 |||||||||| |||||| ||||| | || ||| |||||||||||| ||| || | Sbjct 370442 CTGGTACAGCATGCAGGACAGCTCCTTCGCGTCCGTGTTCACGTAGAACTGAGCA-AGCA 370384 Query 145889 GGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGACGA 145948 ||| |||||||||| ||||| || |||| | ||||||||||| || | | || Sbjct 370383 AGTGACAGGGCGGCAACGCCATCTCGTGCAGCGCGCATGGGTTCCAGGCAGTTAACAGGA 370324 Query 145949 GCCTCCTGCTCTCGGGGTTCCTCTTGA---TCTCCCCTATCAGGTCCCTGAGCTGGTCCA 146005 | | | | | |||||| ||||| ||||| | || | ||| |||||||| Sbjct 370323 GGCGGCGGTCGTTTGGGTTCACCTTGATGGTCTCCACGAT---GGATTTGATCTGGTCCA 370267 Query 146006 CGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGCCCCGAAGTGCCTCCACT 146065 | || | || ||||| | || | || |||| || |||||||| | ||||| Sbjct 370266 CCCCTTCGCCATCGTAATTCGCCTCAAACCCCTTGTACTGTGCTCCGAAGTGGCGCCACT 370207 Query 146066 GGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGT--GCC--CCAGCC-CGGCCCG 146120 |||| |||||||| || || || ||| |||| | | ||| | |||| ||| | Sbjct 370206 GGAATCCGTAGACAGGGCCGAGATCC---ATCTCCTTATTCGCCGTCAAGCCGCGG--CT 370152 Query 146121 GGCGAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCTCGCGGAGAGCTC 146180 | |||| || || || || ||||| | |||||||| | | | || | | | ||| Sbjct 370151 GTCGAGAAACTCGCGCGAGCCGTTACCATCCCAGATGTGAATGTCCTTGTCCGCCAGCAA 370092 Query 146181 ATTGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAA 146240 | || || || || | | |||||| |||||||| ||| || || | |||||| Sbjct 370091 CTGGGCGTTTGTTTCGCCGCGCAGGAACCACAGCAGCTCCTCGCACACGCCGCGCCAGAA 370032 Query 146241 GACCCTCTTGGTGGTCA 146257 || | ||| || |||| Sbjct 370031 AACACGCTTCGTTGTCA 370015 Score = 104 bits (114), Expect = 3e-17 Identities = 196/283 (69%), Gaps = 14/283 (5%) Strand=Plus/Minus Query 145819 CCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTC---CCCGCCCG---CCACG 145872 |||||||| | |||||||||||||||| |||||| ||||| | || ||| |||| Sbjct 370826 CCCATGTCGCACGAGCGCTGGTACAGCATGCAGGACAGCTCCTTCGCGTCCGTGTTCACG 370767 Query 145873 TAGAACTG-GCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTT 145931 |||||||| ||| || | ||| |||||||||| ||||| || |||| | ||||| Sbjct 370766 TAGAACTGAGCA-AGCAAGTGACAGGGCGGCAACGCCATCTCGTGCAGCGCGCATGGGTT 370708 Query 145932 CCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGA---TCTCCCCTATCAG 145988 |||||| || | | ||| | | | | |||||| ||||| ||||| | || Sbjct 370707 CCAGGCAGTTAACAGGAGGCGGCGGTCGTTTGGGTTCACCTTGATGGTCTCCACGAT--- 370651 Query 145989 GTCCCTGAGCTGGTCCACGCCCTGCCCCCGGTAATCTGTCTTGGAGTCCACGTACGCGGC 146048 | ||| ||||||||| || | || ||||| | || | || |||| || Sbjct 370650 GGATTTGATCTGGTCCACCCCTTCGCCATCGTAATTCGCCTCAAACCCCTTGTACTGTGC 370591 Query 146049 CCCGAAGTGCCTCCACTGGAACCCGTAGACGGGCCCCAGGTCC 146091 |||||||| | ||||||||| |||||||| || || || ||| Sbjct 370590 TCCGAAGTGGCGCCACTGGAATCCGTAGACAGGGCCGAGATCC 370548 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590076527089480