Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq17 239 5e-58 seq22 113 5e-20 seq31 95.1 1e-14 >seq17 Length=693836 Score = 239 bits (264), Expect = 5e-58 Identities = 320/437 (73%), Gaps = 6/437 (1%) Strand=Plus/Minus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 |||||||||| || |||||||| ||| | ||| | |||||||| || |||| || Sbjct 521765 GAGCCGCTGCAGCAGGAGAACCCGTTCCGCTACGTTCTCTTCCCCATCCAGTACCACGAT 521706 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || ||||||| |||||| || ||| | ||||||| || |||||| | |||||| Sbjct 521705 ATCTGGCGCAAGTACAAGGAGCAGGAGAGCTGCATCTGGACGGTAGAGGAGATCGACCTG 521646 Query 116696 TCCAAGGACACGAGCGACTGGGAG-CGCTTGAACGACAACGAGCGCCATTTCATCAAGCA 116754 ||| |||| || ||||||| | |||| ||||||| || || || || |||||||| Sbjct 521645 GGCAACGACATGAAGGACTGGGTGGCGCT-GAACGACGGGGAACGGCACTTTATCAAGCA 521587 Query 116755 CGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGTTT 116814 |||||| ||||| ||||||| ||||||||||||||| ||||||||| | | ||||||| Sbjct 521586 CGTGCTTGCCTTCTTCGCCGGGAGCGACGGCATCGTCGTCGAGAATCTTGCCCAGCGTTT 521527 Query 116815 CGCTCAG-GAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATGG 116873 | | || || ||| ||||| | |||||||| |||||||| || ||| | |||| Sbjct 521526 C-ATGAGCGACGTGAAGGTGCCGGAGGCGCGCGCGTTCTACGGATTCCAGCTGATGATGG 521468 Query 116874 AGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGT-GCGCTCTTCGGAG 116932 ||||| | ||||| || | || || || | ||||||||| | | | | ||| Sbjct 521467 AGAACATCCACTCAGAGACATACTCTGTGCTACTGGACACGTACATCACAGACAGC-GAG 521409 Query 116933 GAGAAGCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCCGAG 116992 |||||||| || || || |||| ||| ||||||| || ||| || | ||||||| ||| Sbjct 521408 GAGAAGCTGCGGCTGCTGCACGCGATCCAGACGATCCCATGCATCCAGAAGAAGGCGGAG 521349 Query 116993 TGGGCGCTGCGCTGGAT 117009 ||||| |||| ||||| Sbjct 521348 TGGGCCGTGCGGTGGAT 521332 >seq22 Length=1195710 Score = 113 bits (124), Expect = 5e-20 Identities = 179/251 (71%), Gaps = 7/251 (3%) Strand=Plus/Minus Query 117059 GTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAGAAACGCGGC 117118 || |||||| |||||||||| || ||| ||| | || ||||| ||||| ||||| Sbjct 943292 GTGGAGGGCATCTTCTTTTCCGGATCCTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGT 943233 Query 117119 CTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGTCTGCATTGC 117178 || ||||| || |||| |||||||||||||||||||| | |||||||| || || Sbjct 943232 CTGATGCCGGGGTTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGCCTACACACG 943173 Query 117179 GACTTTGCCTGTTTGCTGTTCAA---GCATTTGGTGCAGCGACCG-AGCGCGGCGCGCGT 117234 ||||| || ||| |||||| ||| ||| | ||| || | |||| | |||||| Sbjct 943172 GACTTCGCGTGTCTGCTGTACAACTCGCACATCAAGCACAAACTGCCGCGC-GAGCGCGT 943114 Query 117235 CAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCG-CTTCCTCACCGAAGCGCTGC 117293 ||||||| | || ||||| |||||| | ||| ||| || ||| ||||| | Sbjct 943113 GCTGGAGATCATTGTGGATGCGGTGAACATCGAAC-GCGAGTTCATCTGCGACGCGCTTC 943055 Query 117294 CGGTGCGTCTG 117304 ||||||| ||| Sbjct 943054 CGGTGCGGCTG 943044 >seq31 Length=2885998 Score = 95.1 bits (104), Expect = 1e-14 Identities = 81/99 (82%), Gaps = 1/99 (1%) Strand=Plus/Minus Query 40818 CATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAACATCCAGAA 40877 |||| |||| ||||| |||||||| || | ||||| ||| ||||||||||||||||| Sbjct 1475263 CATC-ACGCCGGCAAGCAGCTGGAGGAGGGCCGCACGCTCTCGGACTACAACATCCAGAA 1475205 Query 40878 GGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 |||| |||||||||| || ||| ||||| || | ||||| Sbjct 1475204 GGAGTCCACGCTGCACCTGGTGCTGCGCCTGCGCGGCGG 1475166 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515218961711120