Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq23 143 7e-29 >seq23 Length=1220009 Score = 143 bits (158), Expect = 7e-29 Identities = 276/402 (69%), Gaps = 14/402 (3%) Strand=Plus/Plus Query 364099 AAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGAGACAGGA 364158 ||||| || | || ||| || | |||||||||||| |||| || ||||| ||||| || Sbjct 334541 AAGACGATCCAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCTCAGATCGAGACGGGC 334600 Query 364159 ACACCCTATATGTTGTACAAAGATTCGTGCAACCGCAAGTCCAACCAGCAGCACCTTGGT 364218 || | || ||||||| ||| | |||||| ||||||| |||||| || ||||||| Sbjct 334601 GGGCCGTTCATCCTGTACAAGGATGCATGCAACAGCAAGTCAAACCAGAAGAACCTTGGG 334660 Query 364219 ACAATTCAGCAGAGC---AACCTATGTACCGAGATTATTGAATACACCGCTCCCGACGAG 364275 || | ||| || || ||||| || || || ||| | || ||||| | || || ||| Sbjct 334661 ACGA-TCA--AGTGCTCGAACCTGTGCACTGAAATTGTCGAGTACACGTCGCCGGAGGAG 334717 Query 364276 ACTGCCGTATGTAACCTTGCGTCGATCGCGCTTCCGGCGTTTGTAAAAGATG------GT 364329 || |||||||| ||||| || || |||||||| ||| || || | | || | Sbjct 334718 ACGGCCGTATGCAACCTCGCCTCCATCGCGCTGCCGCGCTTCGTCGACGTTGAAAAGCGC 334777 Query 364330 ACTTTTGACCACCAGCATCTTTATGACGTAACCTATCATGCTACTTGCAATCTCGACAAG 364389 || ||||||||| ||| || | ||| || | || || |||| || || Sbjct 334778 GAGTTCAACCACCAGCTTCTCTACGCCGTGACGAAGCAGATCACGCGCAACCTAAACCGT 334837 Query 364390 GTTATCGACAAGAATTATTATCCAATTCCTGA-AGCCGAGCGTTCTAATATGCGTCATCG 364448 ||||| ||| || || || || | || || ||| || || ||||| | || Sbjct 334838 GTTATTGACCGCAACTACTA-CCCAGTCGAGACAGCGCGCCGCAGCAACATGCGCAACCG 334896 Query 364449 CCCGATTGGTCTTGGTGTACAGGGCCTCGCTGACGTTTTTAT 364490 || || ||||||||||||||||||||||||||| ||||| Sbjct 334897 TCCCATCGGTCTTGGTGTACAGGGCCTCGCTGACACCTTTAT 334938 Score = 98.7 bits (108), Expect = 3e-15 Identities = 268/409 (66%), Gaps = 6/409 (1%) Strand=Plus/Plus Query 364753 CCCATGCCCACGGCTTCTACTGCACAGATCCTCGGAAACAACGAGTGCTTCGAACCGTTT 364812 |||||||| || || || || | ||||| ||||| ||||||||||| |||||||| || Sbjct 335207 CCCATGCCAACCGCGTCCACCTCGCAGATTCTCGGCAACAACGAGTGTTTCGAACCCTTC 335266 Query 364813 ACAAGCAATCTTTATTCACGCCGGGTTCTTTCCGGAGAATTTCCGGTAGTTAATAAGTAC 364872 || ||| | || ||||| || || ||| || || || || || || |||||| Sbjct 335267 ACCTCGAATATATACGTCCGCCGTGTGCTGAGCGGCGAGTTCCCTGTGGTGAACAAGTAC 335326 Query 364873 CTAGTCAAGGATCTTTCCGACCGCGGGCTGTGGGGTGACAGCATGAAGAACTATATCATC 364932 || |||| ||| || || || || |||||| ||| ||| ||| | |||||| Sbjct 335327 CTCGTCATGGACCTCATCGCGCGTGGCCTGTGGAATGAGCAAATGCGCAACGAAATCATC 335386 Query 364933 GCCGCTAATGGTTCTGTGCAGAACATTCCAGGATTTCCAGAAGATCTGAAGCCTATTTAC 364992 | |||||||| | | |||||| || | ||||| || || ||| ||||| Sbjct 335387 TCTTACAATGGTTCGATCCTCAACATTGACGGCATCCCAGATGACCTAAAGGAGCTTTAC 335446 Query 364993 AAAACCGTATGGGAAATTTCCATGCGAACTCTCATTGATATGGCGGCCGATCGCGGTGCT 365052 ||||| ||||| || | ||| | | || || ||||| ||| ||||| Sbjct 335447 CGGACCGTGTGGGAGATCCCGCAGCGCAAGTTGATCGACATGGCACGCGACCGCGGCCAA 335506 Query 365053 TTTATCTGTCAGAGCCAGTCGTTTAACGTATTCATGACTCAG---CCAACCTCCGCCAAG 365109 | ||| ||| ||| || | ||| | || | |||| || ||||| | | || Sbjct 335507 TACATCGACCAGTCCCAATCACTGAACCTCTTTCT---TCAGAGCCCCACCTCTGGCCAG 335563 Query 365110 CTTACATCCATGCATTTCTACGGGTGGAAATCCGGTCTTAAGACAGGTG 365158 | || ||||||| |||||||| ||| | | || || ||||| |||| Sbjct 335564 ATCACGTCCATGCTCTTCTACGGCTGGGAGGCTGGACTGAAGACTGGTG 335612 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303352982128934