Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq23 116 3e-21 seq22 87.8 2e-12 >seq23 Length=1220009 Score = 116 bits (128), Expect = 3e-21 Identities = 185/261 (71%), Gaps = 7/261 (3%) Strand=Plus/Minus Query 145051 GTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTTAGACGT 145110 ||||| || || || | ||||||||| || |||||| || | || | || || || Sbjct 335326 GTACTTGTTCACCACAGGGAACTCGCCGCTCAGCACACGGCGGACGTATATATTCGAGGT 335267 Query 145111 GAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGGCATGTA 145170 ||||||||| ||| ||||||| ||||| || || || | ||| | ||||| |||||| Sbjct 335266 GAAGGGTTCGAAACACTCGTTGTTGCCGAGAATCTGCGAGGTGGACGCGGTTGGCATGGG 335207 Query 145171 CGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGTACCCCA 145230 | ||||| | ||| ||||| | ||| || | ||| | || || || | |||| Sbjct 335206 GGACACCAGCAGTGAGTTGCGTATGCCTACCTGCATGACCTTCTCTTTGAGGCTGGCCCA 335147 Query 145231 ATCCCA--TAGCGAAG-TCGGCCTCACG---TCCCACATGTCGTACTGCAAAATGCCCTC 145284 ||||| | || | |||||| | || | |||||| ||| |||||| ||||||||| Sbjct 335146 GTCCCAGCGACCGCTGTTCGGCCGCGCGTTCTTCCACATATCGAACTGCAGAATGCCCTC 335087 Query 145285 GCTGGCGGGGCTG-CCTTGAA 145304 ||| || |||||| ||||||| Sbjct 335086 GCTTGCCGGGCTGCCCTTGAA 335066 Score = 86.0 bits (94), Expect = 6e-12 Identities = 125/174 (72%), Gaps = 2/174 (1%) Strand=Plus/Minus Query 145625 GCGATCGACGCCAAATTACAAACTGCCGTCTCCT-CGGCGTCGCTGTATTGTACGATCTC 145683 ||||| || || | || || || |||||||||| ||||| || |||| | || || || Sbjct 334746 GCGATGGAGGCGAGGTTGCATACGGCCGTCTCCTCCGGCGACG-TGTACTCGACAATTTC 334688 Query 145684 GGCGCACAAATTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCA 145743 | ||||| || || ||||| || || || || | ||| || || |||||||| Sbjct 334687 AGTGCACAGGTTCGAGCACTTGATCGTCCCAAGGTTCTTCTGGTTTGACTTGCTGTTGCA 334628 Query 145744 CGCGTCCTTGTAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT 145797 || |||||||| || ||| |||| ||||| ||||| | ||| | ||||| ||| Sbjct 334627 TGCATCCTTGTACAGGATGAACGGCCCGCCCGTCTCGATCTGAGACTCCAGGAT 334574 >seq22 Length=1195710 Score = 87.8 bits (96), Expect = 2e-12 Identities = 62/71 (87%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 46240 ATGCCCGGCCTGACGTTTAGCAACGAGCTGATATCGCGCGACGAGGGCCTGCATACGGAC 46299 ||||| || ||||||| ||||||||||| || ||||||||||||||||| || |||||| Sbjct 943229 ATGCCGGGGTTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGAC 943170 Query 46300 TTTGCGTGTCT 46310 || |||||||| Sbjct 943169 TTCGCGTGTCT 943159 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 472012581694080