Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq23 89.7 1e-12 seq22 89.7 1e-12 >seq23 Length=1220009 Score = 89.7 bits (98), Expect = 1e-12 Identities = 173/254 (68%), Gaps = 6/254 (2%) Strand=Plus/Plus Query 218518 GACTTCATCGACAAGGAGCTCATTCTTTTCTCGCGGTATGATGTGGAGCGTTCTATTCCC 218577 ||||| | |||||||||||||| || ||||| ||| ||||| ||| || Sbjct 957519 GACTTTGTGGACAAGGAGCTCATCCTCTTCTCCATCGCTGACTGCGAGCGCAGTATCCCG 957578 Query 218578 AGCGTGGTGGATGGCCTCAAGCCATCGCAGCGTAAGATCCTCTTTGCCGCATTCAAGCGG 218637 || | | | || ||| ||||||| || || ||||||||||| || |||||||| Sbjct 957579 AGTGCGATTGACGGCTTCAAGCCCGGCCAACGCAAGATCCTCTTCTCCTGCTTCAAGCGT 957638 Query 218638 AACCTGGTTCAAGAAATTAAGGTCGCTCAGTTTTCTGGTTATGTATCCGAAATTTCTGGC 218697 ||| |||| | || ||||| | ||| || | || || || || || || | | Sbjct 957639 AACTTGGTGAACTCTATCAAGGTGGTGCAGCTTGCCGGCTACGTCTCGGAGCACTCCGCC 957698 Query 218698 TACCATCACGGTGAGCA---GAGTCTGCAGGGTGCCATTGTAGGCATGGCACAGGACTAT 218754 ||||||||||| ||||| | | ||||| | || || || ||||| ||||||| | Sbjct 957699 TACCATCACGGCGAGCAGTCGCTTGTGCAG---ACGATCGTCGGAATGGCGCAGGACTTT 957755 Query 218755 GTGGGCAGTAACAA 218768 ||||| || ||||| Sbjct 957756 GTGGGTAGCAACAA 957769 >seq22 Length=1195710 Score = 89.7 bits (98), Expect = 1e-12 Identities = 112/154 (73%), Gaps = 0/154 (0%) Strand=Plus/Plus Query 251563 TCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATGAAGTCGAAGGGGTTTGTG 251622 || ||||| || | ||||||| ||| ||||| | |||||||||||| ||||| | || Sbjct 942752 TCAAAGAAGTTCGTTTTGCCCTGCAGCGAGATCATCTCCATGAAGTCAAAGGGCTGAGTC 942811 Query 251623 GCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGGTCTGCCACAAACTCCAGA 251682 || ||||| ||||| | ||| || | || | | ||||| || || ||||| | Sbjct 942812 GCGTTGTAGTGCTTCTCCTCGCCCAGCGACACAAGCAGCCGGTCCGCGACGAACTCAATG 942871 Query 251683 TACTGTCCCATCAGTTCAGAGTTCATGCCAATCA 251716 ||||| ||||||| || | ||||||||||||| Sbjct 942872 TACTGCGCCATCAGCTCGGCATTCATGCCAATCA 942905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027836312741117