Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq29 87.8 3e-12 seq22 87.8 3e-12 seq3 87.8 3e-12 >seq29 Length=1563028 Score = 87.8 bits (96), Expect = 3e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Minus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 84520 |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct 583210 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGTGGGTTCGATCCCCAC 583153 >seq22 Length=1195710 Score = 87.8 bits (96), Expect = 3e-12 Identities = 183/266 (69%), Gaps = 15/266 (6%) Strand=Plus/Plus Query 10113 TTCATGCCAATCATGCGGCAGGGGATG-GCGTCGCAAATGAAGTCCTTTTCGTTGGCGAC 10171 ||||||||||||| || ||| ||| | |||||||| ||||| || |||| || || Sbjct 943033 TTCATGCCAATCA-GCCGCACCGGAAGCGCGTCGCAGATGAACTCGCGTTCGATGTTCAC 943091 Query 10172 CGCTTCCTCGACGATGCTCTTTACCACG---TCAAGGGACAGCTTGTTCTCGAGCTTCGA 10228 ||| ||| || ||| ||| | |||| || | | ||| |||| || || | ||| Sbjct 943092 CGCATCC---ACAATGATCTCCAGCACGCGCTCGCGCGGCAGTTTGTGCTTGATGTGCGA 943148 Query 10229 AT---ACAGGAGCTCTCCAAACTGCTGGTGGAGGCCCTCGTCGCGGCTGATGAACTCGTT 10285 | |||| || | || | | ||| |||||||||||||| ||||| |||||| Sbjct 943149 GTTGTACAGCAGACACGCGAAGTCCGTGTGTAGGCCCTCGTCGCGCGAGATGAGCTCGTT 943208 Query 10286 GGACAAACCCAGACCGGGCATGAGCCCCCGGTTGCGCAGCCAGAAAATGGCGCAGAACGA 10345 | || || || ||||| || || || || ||||||||| | |||||||| || Sbjct 943209 GCTGAACGTCAACCCCGGCATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAAGGA 943268 Query 10346 CCCGGAGAACAGAAGA--CCCTCCAC 10369 ||| ||| |||||| |||||||| Sbjct 943269 TCCG--GAAAAGAAGATGCCCTCCAC 943292 >seq3 Length=593167 Score = 87.8 bits (96), Expect = 3e-12 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 84463 TAGCTCAGTCGGCAGAGCGCAAGGCTCTTAACCTTGTGGTCGTGGGTTCGAGCCCCAC 84520 |||||||||||| |||||||| ||||||||||| ||||||||||||||||| |||||| Sbjct 539629 TAGCTCAGTCGGTAGAGCGCACGGCTCTTAACCGTGTGGTCGTGGGTTCGATCCCCAC 539686 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921621973749640