Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq23 132 5e-26 >seq23 Length=1220009 Score = 132 bits (146), Expect = 5e-26 Identities = 224/319 (70%), Gaps = 18/319 (6%) Strand=Plus/Plus Query 95089 AACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAGATCCTTGGCAACAAC 95148 ||| | ||||| ||| |||||||||| || || ||||| ||||||| || ||||||||| Sbjct 335189 AACTCACTGCTGGTGTCCCCCATGCCAACCGCGTCCACCTCGCAGATTCTCGGCAACAAC 335248 Query 95149 GAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTGCTCGCCGGGGAATTC 95208 |||| ||||||||||||||||| || | ||| | | || ||||| ||| || ||| Sbjct 335249 GAGTGTTTCGAACCCTTCACCTCGAATATATACGTCCGCCGTGTGCTGAGCGGCGAGTTC 335308 Query 95209 CCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGTGTGTGGGGTGA-CAA 95267 || || | |||||| ||||| | |||||| | | | || ||||| ||| ||| Sbjct 335309 CCTGTGGTGAACAAGTACCTCGTCATGGACCTCATCGCGCGTGGCCTGTGGAATGAGCAA 335368 Query 95268 --GGTCAA--GAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACAT--CCCGCAAAT 95321 | ||| || || || || ||| || || ||| ||||| | || || Sbjct 335369 ATGCGCAACGAAATCATCTCTTA-----CAATGGTTCGATCCTCAACATTGACGGC--AT 335421 Query 95322 ACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGCGTGATACT 95381 || || ||| | |||| ||| ||| ||||||||||||||||||||||||| | | | Sbjct 335422 CCCAGATGACCTAAAGGAGCTTTACCGGACCGTGTGGGAGATCCCGCAGCGCAAGTTGAT 335481 Query 95382 CGAC----CACGCGGCCGC 95396 |||| |||||| |||| Sbjct 335482 CGACATGGCACGCGACCGC 335500 Score = 120 bits (132), Expect = 3e-22 Identities = 122/159 (77%), Gaps = 0/159 (0%) Strand=Plus/Plus Query 94480 CAGGTGGAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAAC 94539 ||| | |||||||| ||| | |||| ||| |||||| | |||| |||||| ||| Sbjct 334586 CAGATCGAGACGGGCGGGCCGTTCATCCTGTACAAGGATGCATGCAACAGCAAGTCAAAC 334645 Query 94540 CAGCAGCACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACT 94599 ||| || |||| ||| ||||||| ||||||| |||||||| || ||||||||||| || Sbjct 334646 CAGAAGAACCTTGGGACGATCAAGTGCTCGAACCTGTGCACTGAAATTGTCGAGTACACG 334705 Query 94600 TCTCCGGACGAGATTGCTGTGTGTAACCTGGGCTCCATC 94638 || ||||| |||| || || || ||||| | ||||||| Sbjct 334706 TCGCCGGAGGAGACGGCCGTATGCAACCTCGCCTCCATC 334744 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494722971190520