Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq31 91.5 2e-13 seq27 87.8 2e-12 >seq31 Length=2885998 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 46471 CTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGT 46530 ||||||||| | ||| | || |||||||||| |||||| ||| | || | | ||| Sbjct 1478014 CTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGT 1478073 Query 46531 GTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTG 46590 |||||||| ||||| |||| || ||| || ||||| |||||||| || || ||||| || Sbjct 1478074 GTCGCTCGGCTCCACCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTG 1478133 Query 46591 CAT 46593 ||| Sbjct 1478134 CAT 1478136 >seq27 Length=1656817 Score = 87.8 bits (96), Expect = 2e-12 Identities = 93/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Plus Query 46471 CTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGT 46530 ||||||||| | ||| | || |||||||||| |||||| ||| | || | | ||| Sbjct 1129285 CTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGT 1129344 Query 46531 GTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTG 46590 |||||||| ||||| || | || ||| || ||||| |||||||| || || ||||| || Sbjct 1129345 GTCGCTCGCCTCCACCTCGAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTG 1129404 Query 46591 CAT 46593 ||| Sbjct 1129405 CAT 1129407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565238138577240