Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq17 145 8e-30 seq22 98.7 1e-15 >seq17 Length=693836 Score = 145 bits (160), Expect = 8e-30 Identities = 242/347 (70%), Gaps = 2/347 (1%) Strand=Plus/Plus Query 133067 TGCTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGA 133126 |||| | ||||| |||| ||||| || ||||| | | || ||| || ||||| | || Sbjct 521324 TGCTCCCAATCCACCGCACGGCCCACTCCGCCTTCTTCTGGATGCATGGGATCGTCTGGA 521383 Query 133127 TGGCGTTCAACAAACGGAGTTTCTCTTCCGAGGAACGCACGTAGGTGTCGATGAGGGTCG 133186 | |||| || || || || ||||| || | | ||| ||||| | || | Sbjct 521384 TCGCGTGCAGCAGCCGCAGCTTCTCCTCGCTGTCTGTGATGTACGTGTCCAGTAGCACAG 521443 Query 133187 AATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCT 133246 | || | || ||||| | ||||||||| | || || ||||| || ||||||| Sbjct 521444 AGTATGTCTCTGAGTGGATGTTCTCCATCATCAGCTGGAATCCGTAGAACGCGCGCGCCT 521503 Query 133247 CGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306 | ||||| ||| || |||||||| | | ||||| ||| |||||||||||||| Sbjct 521504 CCGGCACCTTCACGTCGCTCATGAAACGCTGGGCAAGATTCTCGACGACGATGCCGTCGC 521563 Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTCAAGCG-C 133365 | ||||||| ||||| |||||||||||||| || || || || ||||||| |||| | Sbjct 521564 TCCCGGCGAAGAAGGCAAGCACGTGCTTGATAAAGTGCCGTTCCCCGTCGTTC-AGCGCC 521622 Query 133366 TCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCA 133412 ||||||| | |||| ||| |||||| | |||||| || ||||| Sbjct 521623 ACCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCTACCGTCCA 521669 >seq22 Length=1195710 Score = 98.7 bits (108), Expect = 1e-15 Identities = 146/207 (71%), Gaps = 0/207 (0%) Strand=Plus/Plus Query 132591 CATCACGCCAAATTTTTGATATTCGCCCACCTTTTTCTCaaaaaaaTTAGTTTTTCCCTC 132650 ||||||||| || || || ||||||||||| ||||||| || || ||||| |||| Sbjct 942715 CATCACGCCGGCCTTCTGGTACTCGCCCACCTTCCTCTCAAAGAAGTTCGTTTTGCCCTG 942774 Query 132651 CAAGGAAATGAGCGTCATAAAATCCAAGGGGTTGGCTGTGTTGTAGTGCTTGGTGCCGAT 132710 || || || | | ||| || || ||||| | | | |||||||||||| || Sbjct 942775 CAGCGAGATCATCTCCATGAAGTCAAAGGGCTGAGTCGCGTTGTAGTGCTTCTCCTCGCC 942834 Query 132711 CAGGTCGACGAGCAGCCTGTCGGCCACGAACTCGATGTATTGCGACATGGTTTCGCAATT 132770 ||| || ||||||| ||| || |||||||| ||||| |||| ||| ||| ||| Sbjct 942835 CAGCGACACAAGCAGCCGGTCCGCGACGAACTCAATGTACTGCGCCATCAGCTCGGCATT 942894 Query 132771 AAGTCCCAGCAGACGCACCGGCAGCGC 132797 | || | ||| |||||||| ||||| Sbjct 942895 CATGCCAATCAGCCGCACCGGAAGCGC 942921 Score = 87.8 bits (96), Expect = 2e-12 Identities = 174/253 (69%), Gaps = 11/253 (4%) Strand=Plus/Plus Query 132780 CAGACGCACCGGCAGCGCTTCGGTGA-GAAAGCGTTGCTCGATGGCGACCGCGTCGGTGA 132838 ||| |||||||| ||||| ||| || ||| || | |||||| ||||| || | Sbjct 943044 CAGCCGCACCGGAAGCGCGTCGCAGATGAACTCGC-GTTCGATGTTCACCGCATCCACAA 943102 Query 132839 CGATTTCCCTAACGCGCGCCGCGCTCGGCCGTT---GCACCAAATGC---TTGAACATCA 132892 ||| ||| |||||| | || |||| ||| || | ||| ||| ||| || Sbjct 943103 TGATCTCCAGCACGCGCTC---GCGCGGCAGTTTGTGCTTGATGTGCGAGTTGTACAGCA 943159 Query 132893 AGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGTCA 132952 || || ||||| || | ||||||||| | || ||||| ||||||||||| |||| Sbjct 943160 GACACGCGAAGTCCGTGTGTAGGCCCTCGTCGCGCGAGATGAGCTCGTTGCTGAACGTCA 943219 Query 132953 AGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAAGA 133012 | || ||||| || ||||| || || ||||| || | ||| ||| || ||||||| Sbjct 943220 ACCCCGGCATCAGACCGCGCTTCTTCAGCCAGAACAGCGCGCAGAAGGATCCGGAAAAGA 943279 Query 133013 AGACGCCCTCGAC 133025 ||| |||||| || Sbjct 943280 AGATGCCCTCCAC 943292 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500172568670080