Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq23 98.7 2e-15 >seq23 Length=1220009 Score = 98.7 bits (108), Expect = 2e-15 Identities = 607/976 (62%), Gaps = 25/976 (3%) Strand=Plus/Minus Query 212694 AGGTTCAGGGACTGACTCTGGTCTATGAATGGGGCCCTGTCAGCG-GCCATGTCTATGAT 212752 |||||||| || || |||||| ||| || || | | ||| ||| |||||||| || | Sbjct 335535 AGGTTCAGTGATTGGGACTGGTCGATGTATTGGCCGCGGTC-GCGTGCCATGTCGATCAA 335477 Query 212753 ATCTCTCTGGGAGAGCTCCCACACGGTCTTGAAGATTTCTTTGAGGTCCTCTGGGAAGCC 212812 | | ||| | || ||||||||||||| | | | || || ||||| ||||||| ||| Sbjct 335476 CTTGCGCTGCGGGATCTCCCACACGGTCCGGTAAAGCTCCTTTAGGTCATCTGGGATGCC 335417 Query 212813 GGGGATGTTCTGCACAGACCCCCTGTGTATGGTCAGCTGCAGGCGCATGTCCTCGTTCCA 212872 | ||||| | | || || ||| | | | | |||||| | ||| ||||| Sbjct 335416 GTCAATGTTGAGGATCGAACCATTGTAAGAGATGATTTCGTTGCGCATTTGCTCATTCCA 335357 Query 212873 GAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATCTGGAAGTCACCTGA 212932 ||||| | | ||| | |||| |||| ||| || | |||| || || Sbjct 335356 CAGGCCACGCGCGATGAGGTCCATGACGAGGTACTTGTTCACCACAGGGAACTCGCCGCT 335297 Query 212933 GAGCACCCTCCTCTGGTAAAAGTTTGAAGTGTAGGGCTCGATGCTCTCGTTGTTCCCCAG 212992 ||||| | | ||| | || || ||| |||| |||| | ||||||||| || || Sbjct 335296 CAGCACACGGCGGACGTATATATTCGAGGTGAAGGGTTCGAAACACTCGTTGTTGCCGAG 335237 Query 212993 AATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGACTGTTCCTCA---CTCC 213049 |||||| | ||| || || |||||||| | |||||| || ||| | | || | Sbjct 335236 AATCTGCGAGGTGGACGCGGTTGGCATGGGGGACACCAGCAGTGAGTTGCGTATGCCTAC 335177 Query 213050 GTGCTCGCCGATGAGGCGCCGAAGCTCTGCCCAGTCCCATCTGCCAGACAGGTCCTCGTC 213109 ||| | | | | || ||| ||||||||||| | ||| | | ||| | Sbjct 335176 CTGCATGACCTTCT--CTTTGAGGCTG-GCCCAGTCCCAGC-----GACCGCTGTTCGGC 335125 Query 213110 CTTCACGTTC---CACATGTCAAACTGCAAGATGCCTTTGCTCACGGGGCTGCCCTGGTA 213166 | | ||||| ||||| || ||||||| ||||| | ||| | |||||||||| | | Sbjct 335124 CG-CGCGTTCTTCCACATATCGAACTGCAGAATGCCCTCGCTTGCCGGGCTGCCCTTGAA 335066 Query 213167 AGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGGGCAGCGTAGTA 213226 | ||| || || | |||||| || ||||| |||| || | || ||| |||| Sbjct 335065 GGTCTCGTACGGTCCCTCCTCCTTTGCGAGCTCCATCGACGACTCGACCGCGGCGAAGTA 335006 Query 213227 GATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTGAAGGGCATCAT 213286 |||||| || || | | |||| Sbjct 335005 GATGGTCTCGAAGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGGCAGTCG 334946 Query 213287 CATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGTCTGTGTCTCAG 213346 |||| | || ||||| || ||||| || || | |||||||| | || | || Sbjct 334945 CATGAGGATAAAGGTGTCAGCGAGGCCCTGTACACCAAGACCGATGGGACGGTTGCGCAT 334886 Query 213347 GTTAGACTTGGAGCACTC-CTCCAAGGGGTAAAAGTTGCAGTCGATGATCTTGTTGAGGT 213405 ||| | || || || ||| | ||||| |||||| ||| || | ||| |||| Sbjct 334885 GTT-GCTGCGGCGCGCTGTCTCGACTGGGTAGTAGTTGCGGTCAATAACACGGTTTAGGT 334827 Query 213406 TGCGGGTGGCCACTTTGGTGACATGGGCCAGGTACTCGTGATTGAACACG---TAGCCCC 213462 |||| ||| | || || || | || || ||| |||||| || | | Sbjct 334826 TGCGCGTGATCTGCTTCGTCACGGCGTAGAGAAGCTGGTGGTTGAACTCGCGCTTTTCAA 334767 Query 213463 CGTCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAACGGCCACCTCCTGAG 213522 |||| || || ||||| |||||| ||| |||||||| |||||| ||||| | Sbjct 334766 CGTCG---ACGAAGCGCGGCAGCGCGATGGAGGCGAGGTTGCATACGGCCGTCTCCTCCG 334710 Query 213523 AGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGATGGTGCCCAGGTTCT 213582 |||||||| | || || ||||||||||| ||| ||| || || ||||||| Sbjct 334709 GCGACGTGTACTCGACAATTTCAGTGCACAGGTTCGAGCACTTGATCGTCCCAAGGTTCT 334650 Query 213583 GGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGGGGGACCCGGTCTCTA 213642 ||||||||||| |||| | ||||||||| || ||| | || || ||||| | Sbjct 334649 TCTGGTTTGACTTGCTGTTGCATGCATCCTTGTACAGGATGAACGGCCCGCCCGTCTCGA 334590 Query 213643 GCTGGGACACCAGTAT 213658 ||| ||| |||| || Sbjct 334589 TCTGAGACTCCAGGAT 334574 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931532369166080