Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_020864.1 Length=205622 Score E Sequences producing significant alignments: (Bits) Value seq21 152 7e-32 seq23 118 1e-21 >seq21 Length=1047715 Score = 152 bits (168), Expect = 7e-32 Identities = 348/519 (67%), Gaps = 5/519 (1%) Strand=Plus/Plus Query 195299 GCTATTGGTATCGATTTAGGAACTACTTACTCATGTGTTGGTGTATGGCAAAATGATCGT 195358 || || || ||||| |||| || || ||||| || || || || | | || || | Sbjct 415208 GCGATCGGCATCGACCTAGGCACGACATACTCGTGCGTCGGCGTCTTCAAGAACGAACAG 415267 Query 195359 GTAGAGATTATCCCGAATGACCAAGGAAACCGTACAACTCCATCGTACGTTGCCTTTACA 195418 || || ||||| | || ||||| || ||||| ||||| || || || || ||||| || Sbjct 415268 GTGGAAATTATTGCCAACGACCAGGGCAACCGCACAACGCCGTCCTATGTGGCCTTCACG 415327 Query 195419 GATAATGAACGTCTCGTTGGAGATGCCGCAAAAAATCAGACAGCTATGAACCCTATCAAT 195478 || | || || || | || ||||||||||| || ||| || |||||||| | ||| Sbjct 415328 GAGACGGAGCGCCTGATCGGCGATGCCGCAAAGAACCAGGTGGCGATGAACCCAAGCAAC 415387 Query 195479 ACTGTCTTTGACGCGAAGCGTCTTATTGGTCGCAAGTTTTCGGATAAGAAAGTCCAAGAC 195538 || || |||||||||||||| | || || ||||||| ||| | | || | Sbjct 415388 ACGGTGTTTGACGCGAAGCGCATGATCGGCCGCAAGTACGACGATCCCGACCTTCAGTCC 415447 Query 195539 GATATAAAGGACTGGTCTTATGAAGTTGTTCCCGGTGTGGCTGATAAGCCTATGATTAAT 195598 || || ||| ||||| | | | ||| || ||| || || ||||| | || | Sbjct 415448 GACATGAAGCACTGGCCCT-TCAAG--GTGACCGTCAAGGATGGCAAGCCCGTCATCGAG 415504 Query 195599 GTTGAATTTCACGGTGAGAAGAAACAATTTGCTCCCGAAGAAATTTCGTCTATGGTGTTG 195658 || || | ||| || || || ||| || || ||||| || |||||||| || Sbjct 415505 GTCGAGTATCAGGGCCAGTCCAAGATGTTTTTCCCGGAGGAAATCTCTGCTATGGTGCTG 415564 Query 195659 ATTAAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTG 195718 |||||||||||||| |||||| | | | | || | || ||||| | || ||| | Sbjct 415565 CAGAAGATGAAGGAGACGGCGGAAGCCTACCTCGGCACGACCGTGAAGAACGCCGTTATA 415624 Query 195719 ACTGTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATT 195778 || || || || ||||||| || || || || ||||| || ||||| || | ||||| Sbjct 415625 ACCGTCCCGGCGTACTTCAACGACTCGCAGCGTCAGGCAACGAAGGATGCCGGGGCTATC 415684 Query 195779 GCGGGTCTAAACTGT-CTTAGAATTATCAATGAACCAAC 195816 || || || || ||| || | || ||||| || || || Sbjct 415685 GCTGGCCTCAA-TGTGCTGCGCATCATCAACGAGCCGAC 415722 >seq23 Length=1220009 Score = 118 bits (130), Expect = 1e-21 Identities = 222/327 (68%), Gaps = 6/327 (2%) Strand=Plus/Plus Query 195662 AAGATGAAGGAGACTGCGGAATCTTTCATGGGTAAAACTGTGAAAGATGCAGTTGTGACT 195721 ||||||||||||| | || | ||| | || | | ||||| | || || ||||| Sbjct 467636 AAGATGAAGGAGATCTCCGAGACATTCCTCGGCGAGAAGGTGAAGAACGCTGTGGTGACC 467695 Query 195722 GTACCTGCTTACTTCAGTGATTCACAACGACAGGCGACAAAGGACGCTGCTGCTATTGCG 195781 || || || ||||||| |||| | || || ||||| ||||||||| ||| || || Sbjct 467696 GTGCCAGCGTACTTCAATGATGCGCAGCGCCAGGCAACAAAGGACTCTGGCAAGATCGCC 467755 Query 195782 GGTCTAAACTGTCTTAGAATTATCAATGAACCAACAGCGGCTGCAATTGCTTATGGTCTG 195841 || || ||| | | || ||||| || || || |||||||| || || || || || Sbjct 467756 GGCCTTAACGTGGTCCGCATCATCAACGAGCCGACGGCGGCTGCCATCGCGTACGGCCT- 467814 Query 195842 GACAAGAACAAGGACGAAGATAAAAATGTATTGATCTTTGATCTCGGTGGTGGTACGTTT 195901 ||||||| | || || ||| | | |||| || ||||||||||| |||||| Sbjct 467815 -----CAACAAGGCTGGGGAGAAGAATATCCTTGTCTTCGACCTCGGTGGTGGCACGTTT 467869 Query 195902 GATGTCTCACTTCTCAATATTGAAGGTGGTATATTCGAAGTAAAGGCTACTGCTGGTGAT 195961 ||||| || | || | || || | ||| | ||||| || || || ||||| Sbjct 467870 GATGTGTCTTTGCTGACGATCGACGAGGGTTTCTTCGAGGTCGTCGCGACAAACGGTGAC 467929 Query 195962 ACTCATCTAGGTGGTGAAGATTTCGAT 195988 || || || ||||||||||| |||||| Sbjct 467930 ACCCACCTTGGTGGTGAAGACTTCGAT 467956 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 657862095738640