Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq17 156 5e-32 seq22 127 2e-23 seq27 93.3 5e-13 >seq17 Length=693836 Score = 156 bits (172), Expect = 5e-32 Identities = 212/296 (72%), Gaps = 0/296 (0%) Strand=Plus/Plus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || | |||||| ||||| || || | | |||| | ||| | Sbjct 521455 GAGTGGATGTTCTCCATCATCAGCTGGAATCCGTAGAACGCGCGCGCCTCCGGCACCTTC 521514 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || ||||||| || ||| || |||||| | |||||||||||||| ||||||| Sbjct 521515 ACGTCGCTCATGAAACGCTGGGCAAGATTCTCGACGACGATGCCGTCGCTCCCGGCGAAG 521574 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGACG 869812 || || || ||||||||||||||||| || || ||||| | |||| |||||||| Sbjct 521575 AAGGCAAGCACGTGCTTGATAAAGTGCCGTTCCCCGTCGTTCAGCGCCACCCAGTCCTTC 521634 Query 869813 GTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTGTAC 869872 ||||| || ||||| | |||||| | |||||||| || ||| || |||||| Sbjct 521635 ATGTCGTTGCCCAGGTCGATCTCCTCTACCGTCCAGATGCAGCTCTCCTGCTCCTTGTAC 521694 Query 869873 ATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928 | ||| | | ||||| |||| |||||||| || ||||| ||||| || Sbjct 521695 TTGCGCCAGATATCGTGGTACTGGATGGGGAAGAGAACGTAGCGGAACGGGTTCTC 521750 >seq22 Length=1195710 Score = 127 bits (140), Expect = 2e-23 Identities = 148/197 (75%), Gaps = 2/197 (1%) Strand=Plus/Plus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||| |||||||||||| || ||| || ||||| || ||||||| ||||||||| Sbjct 942725 GCCTTCTGGTACTCGCCCACCTTCCTCTCAAAGAAGTTCGTTTTGCCCTGCAGCGAGATC 942784 Query 868751 AACTCCATCCACGGGAACGGGTTG-GGCGTCTTGTAGTGCTTTTCGCATCCGAGCGACGC 868809 | |||||| | | || ||| || | || ||||||||||| || || |||||| | Sbjct 942785 ATCTCCAT-GAAGTCAAAGGGCTGAGTCGCGTTGTAGTGCTTCTCCTCGCCCAGCGACAC 942843 Query 868810 GAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATGCCGAT 868869 ||||| ||||| ||||| ||||| |||||||| ||| || |||| |||||||| || Sbjct 942844 AAGCAGCCGGTCCGCGACGAACTCAATGTACTGCGCCATCAGCTCGGCATTCATGCCAAT 942903 Query 868870 GAGCGCCACCGGCAGCG 868886 ||| |||||| |||| Sbjct 942904 CAGCCGCACCGGAAGCG 942920 >seq27 Length=1656817 Score = 93.3 bits (102), Expect = 5e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 732350 CGAGGTGCACCCGCTGCTCATGCTCGGGGCCTGCGCGTCCATCATCCCGTTCTCCAACCA 732409 |||| || ||||| | | || || || ||||| ||||| ||||| | | ||||||| Sbjct 76806 CGAGATGGACCCGTCGATGATTCTTGGCATTTGCGCCTCCATTATCCCCTACCCCAACCA 76747 Query 732410 CAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGCAG 732455 ||||||| |||||||||||| ||||||| | |||||||| |||||| Sbjct 76746 CAACCAGTCGCCGCGCAACACCTACCAGTCCGCCATGGGTAAGCAG 76701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6107136163606729