Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq17 147 3e-29 seq22 134 2e-25 seq27 96.9 5e-14 >seq17 Length=693836 Score = 147 bits (162), Expect = 3e-29 Identities = 192/266 (72%), Gaps = 0/266 (0%) Strand=Plus/Plus Query 796150 GCCTCGGGTACTTGGACCTCCTTCATGAAGCGGCCGGCCAGGTTCTCAGCCACGATGCCG 796209 ||||| || || | || || ||||||| || ||| || ||||| | ||||||||| Sbjct 521500 GCCTCCGGCACCTTCACGTCGCTCATGAAACGCTGGGCAAGATTCTCGACGACGATGCCG 521559 Query 796210 TCGCTGGCGGCGAAAAAGGCGAGGACGTGCTTGATAAAGTGACGCTCGTCGTCGCTGAGC 796269 ||||| ||||||| ||||| || ||||||||||||||||| || || ||||| | ||| Sbjct 521560 TCGCTCCCGGCGAAGAAGGCAAGCACGTGCTTGATAAAGTGCCGTTCCCCGTCGTTCAGC 521619 Query 796270 GAGACCCAGTGGACCGTGTCGGCGCCGAGGTCGACCTCCTCGGCGGTCCAAAAGGAGGCC 796329 | ||||||| | ||||| ||| ||||||| |||||| | ||||| | | || | Sbjct 521620 GCCACCCAGTCCTTCATGTCGTTGCCCAGGTCGATCTCCTCTACCGTCCAGATGCAGCTC 521679 Query 796330 TCGGCCTTTTTGTACATCTCCCATATCCGTTGGTAGCGGATGGGGAACAGAACAAAGCGA 796389 || || |||||| | ||| || ||||| |||||||||| ||||| |||| Sbjct 521680 TCCTGCTCCTTGTACTTGCGCCAGATATCGTGGTACTGGATGGGGAAGAGAACGTAGCGG 521739 Query 796390 TTGGGGTTCTCGCGTAGCAGCGGCTC 796415 |||||||| | |||||||||| Sbjct 521740 AACGGGTTCTCCTGCTGCAGCGGCTC 521765 >seq22 Length=1195710 Score = 134 bits (148), Expect = 2e-25 Identities = 168/227 (74%), Gaps = 5/227 (2%) Strand=Plus/Plus Query 793869 GACGTCCTCTCCGTCCTCGATGTGACGCCCGCCTTGGCATACTCGCCCACGCGCCGCTCG 793928 ||||||| ||||| ||| | ||||| ||||| ||||||||||| || ||| Sbjct 942698 GACGTCCCCTCCGCGCTCA---TCACGCCGGCCTTCTGGTACTCGCCCACCTTCCTCTCA 942754 Query 793929 AAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTG-GCCGT 793987 || ||||| || ||||||| |||||||||| |||||| | | || ||| || | || Sbjct 942755 AAGAAGTTCGTTTTGCCCTGCAGCGAGATCATCTCCATGAA-GTCAAAGGGCTGAGTCGC 942813 Query 793988 CAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATGTA 794047 |||||||||||| || |||||| ||||||| ||||| |||||||| |||||||| Sbjct 942814 GTTGTAGTGCTTCTCCTCGCCCAGCGACACAAGCAGCCGGTCCGCGACGAACTCAATGTA 942873 Query 794048 CTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAGCG 794094 ||| ||| || |||| |||||||| || ||| ||| || |||| Sbjct 942874 CTGCGCCATCAGCTCGGCATTCATGCCAATCAGCCGCACCGGAAGCG 942920 >seq27 Length=1656817 Score = 96.9 bits (106), Expect = 5e-14 Identities = 85/106 (80%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 652894 CGAGGTGCACCCGCTGCTCATGCTGGGCGCCTGCGCTTCCATCATCCCCTTTTCCAACCA 652953 |||| || ||||| | | || || ||| ||||| ||||| ||||||| ||||||| Sbjct 76806 CGAGATGGACCCGTCGATGATTCTTGGCATTTGCGCCTCCATTATCCCCTACCCCAACCA 76747 Query 652954 CAACCAGGCGCCGCGCAACATCTACCAGACGGCCATGGGCAAGCAG 652999 ||||||| |||||||||||| ||||||| | |||||||| |||||| Sbjct 76746 CAACCAGTCGCCGCGCAACACCTACCAGTCCGCCATGGGTAAGCAG 76701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7916242464141243