Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq22 93.3 4e-14 seq23 86.0 6e-12 >seq22 Length=1195710 Score = 93.3 bits (102), Expect = 4e-14 Identities = 63/71 (89%), Gaps = 0/71 (0%) Strand=Plus/Minus Query 46914 ATGCCGGGCCTGACGTTCAGTAACGAGTTGATCTCGCGCGACGAAGGACTACACACGGAC 46973 |||||||| |||||||||| |||||| | |||||||||||||| || |||||||||||| Sbjct 943229 ATGCCGGGGTTGACGTTCAGCAACGAGCTCATCTCGCGCGACGAGGGCCTACACACGGAC 943170 Query 46974 TTTGCGTGTCT 46984 || |||||||| Sbjct 943169 TTCGCGTGTCT 943159 >seq23 Length=1220009 Score = 86.0 bits (94), Expect = 6e-12 Identities = 146/207 (71%), Gaps = 6/207 (3%) Strand=Plus/Minus Query 148110 GTAGATGCCGTCGATGCTGTCGT-TTTTGACGCCAAGCAAAAAACACGAACACATTTGCG 148168 ||||||||||||||||||||||| || |||||| | || || ||||| | |||||||| Sbjct 334093 GTAGATGCCGTCGATGCTGTCGTCCTTCGACGCC-ACCAGGAAGCACGAGCTCATTTGCG 334035 Query 148169 GAATCCGCGTTCCCGCCGAGAAAAGGGTGGGACTCGCGTGCGTAAACAA--TTTTTGACT 148226 | || | || || || ||| ||||| ||| | ||||| || || || | || Sbjct 334034 GCTTCGGGGTGCCAGCGTTGAAGAGGGTTGGAGTAGCGTGGGTGAAAAAGCCCATCGA-- 333977 Query 148227 CATCATGCGATACGTCTCAATAGCGTCTTCGATGTCGTCGCCGTGAATGCCCAGCGCGAC 148286 ||||| ||||||||| ||| | || || |||||| ||||| || ||||| Sbjct 333976 CATCAGATTGTACGTCTCACGCACGTTGTTGAGATCTCTGCCGTGGATGCCAAGGGCGAC 333917 Query 148287 GCGCATGAGCATGTGCTGTGGTCGTTC 148313 ||||| | ||| ||||| || || || Sbjct 333916 ACGCATAAACATCTGCTGAGGCCGCTC 333890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476610979567320