Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq23 102 1e-16 seq19 82.4 1e-10 seq9 82.4 1e-10 >seq23 Length=1220009 Score = 102 bits (112), Expect = 1e-16 Identities = 168/240 (70%), Gaps = 8/240 (3%) Strand=Plus/Minus Query 111230 GGAAGGGCGATTGATGCCAAATTGCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAA 111289 || || ||||| || || | ||||| || |||||||| ||| |||||||| | | Sbjct 334752 GGCAGCGCGATGGAGGCGAGGTTGCATACGGCCGTCTCCTCCGGCGACGTGTACTCGACA 334693 Query 111290 ATTTCTGTACATAAGTTGGAACTCTTAATCGTCCCCAAATTCTTTTGGTTACTCTTCTTG 111349 ||||| || || | ||| || | ||| |||||||| | ||||| ||||| ||| || Sbjct 334692 ATTTCAGTGCACAGGTTCGAGCACTTGATCGTCCCAAGGTTCTTCTGGTTTGACTTGCTG 334633 Query 111350 TTGCACGCATCCTTGTAGAGCATGTAGGGCGTCCCCGTCTCCGTCTGTGATTTGAGAATA 111409 ||||| ||||||||||| || ||| | ||| |||||||| |||| || | || || Sbjct 334632 TTGCATGCATCCTTGTACAGGATGAACGGCCCGCCCGTCTCGATCTGAGACTCCAGGATG 334573 Query 111410 GCCTTCCAAACAT-CGGCGGCTGGTACAATGGCGTTG---GCCCGTCCCTCCGCCTCGTA 111465 || ||| || | | ||| |||| || | ||| | ||||| ||||||||||| Sbjct 334572 GCAAACCACACCTCCTGCGCCTGG----ATCGTCTTGACACCGCGTCCTTCCGCCTCGTA 334517 >seq19 Length=871217 Score = 82.4 bits (90), Expect = 1e-10 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Plus Query 145282 GCTCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATC 145341 |||| |||||||||| ||| ||||| | ||||| ||||||| | ||||||||||| | || Sbjct 637198 GCTCCTATAGTGTAGCGGTTATCACCTCGGACTCTGAATCCGATAACCCTGGTTCGAGTC 637257 Query 145342 CAGGTAGGAG 145351 |||||||||| Sbjct 637258 CAGGTAGGAG 637267 >seq9 Length=728028 Score = 82.4 bits (90), Expect = 1e-10 Identities = 60/70 (86%), Gaps = 0/70 (0%) Strand=Plus/Minus Query 145282 GCTCTTATAGTGTAGTGGTCATCACTTTGGACTTTGAATCCAACAACCCTGGTTCAAATC 145341 |||| |||||||||| ||| ||||| | ||||| ||||||| | ||||||||||| | || Sbjct 470208 GCTCCTATAGTGTAGCGGTTATCACCTCGGACTCTGAATCCGATAACCCTGGTTCGAGTC 470149 Query 145342 CAGGTAGGAG 145351 |||||||||| Sbjct 470148 CAGGTAGGAG 470139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628031709535200