Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq23 113 5e-20 seq31 91.5 2e-13 seq27 91.5 2e-13 >seq23 Length=1220009 Score = 113 bits (124), Expect = 5e-20 Identities = 146/202 (72%), Gaps = 0/202 (0%) Strand=Plus/Minus Query 80907 GGACGCCAGATTGCACACGGCCACCTCTTCAGCATCTGTAAACTCGACGATTTCCGTGCA 80966 ||| || || ||||| |||||| ||| || | || ||||||| ||||| ||||| Sbjct 334741 GGAGGCGAGGTTGCATACGGCCGTCTCCTCCGGCGACGTGTACTCGACAATTTCAGTGCA 334682 Query 80967 CAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTGACTTGGCGTTGCAAGCGTC 81026 || || || |||| || || || ||||| ||||||||||||||| |||||| || || Sbjct 334681 CAGGTTCGAGCACTTGATCGTCCCAAGGTTCTTCTGGTTTGACTTGCTGTTGCATGCATC 334622 Query 81027 CTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACTTGAGGATGGCGTCCCAAAT 81086 |||||| ||| |||| || ||||||| ||| |||| |||||||| ||| | Sbjct 334621 CTTGTACAGGATGAACGGCCCGCCCGTCTCGATCTGAGACTCCAGGATGGCAAACCACAC 334562 Query 81087 CTCGCGCGCCTTGACCACCTTG 81108 ||| |||||| || | |||| Sbjct 334561 CTCCTGCGCCTGGATCGTCTTG 334540 >seq31 Length=2885998 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| ||||||||||| || | || ||||| ||| | | Sbjct 1478136 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGAGCCGAGC 1478077 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || || |||||||||||||| || || || |||||| Sbjct 1478076 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 1478017 Query 27526 CAG 27528 ||| Sbjct 1478016 CAG 1478014 >seq27 Length=1656817 Score = 91.5 bits (100), Expect = 2e-13 Identities = 94/123 (76%), Gaps = 0/123 (0%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| ||||||||||| || | || ||||| ||| | | Sbjct 1129407 ATGCAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTCGAGGTGGAGGCGAGC 1129348 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | || | || ||||||| || || |||||||||||||| || || || |||||| Sbjct 1129347 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 1129288 Query 27526 CAG 27528 ||| Sbjct 1129287 CAG 1129285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570310136231440