Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq34 127 2e-24 >seq34 Length=534489 Score = 127 bits (140), Expect = 2e-24 Identities = 324/491 (66%), Gaps = 14/491 (3%) Strand=Plus/Plus Query 34230 TGACGACGAAACGTGTGTACTGGAAGGGCGTGGTCGAGGAGCTGCTGTGGTTCGTGAGGG 34289 |||| ||||| ||||| | |||| |||||| ||||||||||||||||||| || | | Sbjct 370015 TGACAACGAAGCGTGTTTTCTGGCGCGGCGTGTGCGAGGAGCTGCTGTGGTTCCTGCGCG 370074 Query 34290 GGGCCACGAACACCAAGGAGCTCTCGTCCCGGGGGGTGAAGATCTGGGACGCTCACGGGT 34349 | | || ||| || || ||| || | || | | |||||||| | | |||| | Sbjct 370075 GCGAAACAAACGCCCAGTTGCTGGCGGACAAGGACATTCACATCTGGGATGGTAACGGCT 370134 Query 34350 CTCGAGACTTTCTGGACAAGCGGGGGTTCCCATCTCGGGAGGAGGGCGACTTGGGCCCGG 34409 | || || ||||| |||| || || || | | ||||| || | ||||| | Sbjct 370135 CGCGCGAGTTTCTCGACAGCCGCGGCTTGACGGCGAATAAGGAGATGGATCTCGGCCCTG 370194 Query 34410 TCTACGGGTTCCAGTGGAGACACTTTGGGGCGGAGTATCGGGGGAGCGAAGCGGACTATT 34469 ||||||| ||||||||| | ||||| || || |||| |||| || ||| | || Sbjct 370195 TCTACGGATTCCAGTGGCGCCACTTCGGAGCACAGTACAAGGGGTTTGAGGCGAATTACG 370254 Query 34470 CGGGACAGGGAGCGGACCAGCTGCAGTACGTGATCGACACCTTGAAGCGGAACCCTGATG 34529 || | || | ||||||| | | | | | | || ||| | ||| |||||| | | Sbjct 370255 ATGGCGAAGGGGTGGACCAGATCAAATCCATCGTGGAGACCATCAAGGTGAACCCAAACG 370314 Query 34530 ACAGAAGGATCGTGATGTGCGCGTGGAACCCGAAGGATCTCCCTCTGATGGCGCTCCCCC 34589 || | | || || | || |||||||| | || | ||||||| | || | Sbjct 370315 ACCGCCGCCTCCTGTTAACTGCCTGGAACCCATGCGCGCTGCACGAGATGGCGTTGCCGC 370374 Query 34590 CGTGCCACACCCTCTGC-CAATTCTACGT---------CGCGAATGGGGAGCTGTCCTGC 34639 | || ||| || ||| || |||||||| |||||| ||||||||||||| Sbjct 370375 CCTGTCACTTGCT-TGCTCAGTTCTACGTGAACACGGACGCGAA---GGAGCTGTCCTGC 370430 Query 34640 CAGCTCTATCAACGATCGGGAGACATGGGGTTAGGGGTGCCGTTCAACATTGCTAGTTAC 34699 ||| || || || ||| | ||||||||| | || || || |||||||| || ||| Sbjct 370431 ATGCTGTACCAGCGCTCGTGCGACATGGGGCTCGGCGTCCCCTTCAACATCGCCTCCTAC 370490 Query 34700 GCTCTGCTCAC 34710 || |||||||| Sbjct 370491 GCGCTGCTCAC 370501 Score = 127 bits (140), Expect = 2e-24 Identities = 324/491 (66%), Gaps = 14/491 (3%) Strand=Plus/Minus Query 6635 GTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCCTAACCCCATGTCTCCCGATCGT 6694 |||||||| ||||| || |||||||| || || || | ||||||||| | ||| || Sbjct 370501 GTGAGCAGCGCGTAGGAGGCGATGTTGAAGGGGACGCCGAGCCCCATGTCGCACGAGCGC 370442 Query 6695 TGATAGAGCTGGCAGGACAGCTCCCCATTCGCG---------ACGTAGAATTG-GCAGAG 6744 || || ||| ||||||||||||| |||||| |||||||| || ||| || Sbjct 370441 TGGTACAGCATGCAGGACAGCTCC---TTCGCGTCCGTGTTCACGTAGAACTGAGCA-AG 370386 Query 6745 GGTGTGGCACGGGGGGAGCGCCATCAGAGGGAGATCCTTCGGGTTCCACGCGCACATCAC 6804 ||| || || || | ||||||| | || | |||||||| || | || Sbjct 370385 CAAGTGACAGGGCGGCAACGCCATCTCGTGCAGCGCGCATGGGTTCCAGGCAGTTAACAG 370326 Query 6805 GATCCTTCTGTCATCAGGGTTCCGCTTCAAGGTGTCGATCACGTACTGCAGCTGGTCCGC 6864 || | | ||| | |||||| ||| | ||| || | | | | | | ||||||| | Sbjct 370325 GAGGCGGCGGTCGTTTGGGTTCACCTTGATGGTCTCCACGATGGATTTGATCTGGTCCAC 370266 Query 6865 TCCCTGTCCCGAATAGTCCGCTTCGCTCCCCCGATACTCCGCCCCAAAGTGTCTCCACTG 6924 || | || || | ||| || |||| |||| || || ||||| | |||||| Sbjct 370265 CCCTTCGCCATCGTAATTCGCCTCAAACCCCTTGTACTGTGCTCCGAAGTGGCGCCACTG 370206 Query 6925 GAACCCGTAGACCGGGCCCAAGTCGCCCTCCTCCCGAGATGGGAACCCCCGCTTGTCCAG 6984 ||| |||||||| ||||| | || ||||| | | || || || |||| || Sbjct 370205 GAATCCGTAGACAGGGCCGAGATCCATCTCCTTATTCGCCGTCAAGCCGCGGCTGTCGAG 370146 Query 6985 AAAGTCTCGAGACCCGTGAGCGTCCCAGATCTTCACCCCCCGGGACGAGAGCTCCTTGGT 7044 ||| || || || |||| | | |||||||| | | || | || ||| || || Sbjct 370145 AAACTCGCGCGAGCCGTTACCATCCCAGATGTGAATGTCCTTGTCCGCCAGCAACTGGGC 370086 Query 7045 GTTCGTGGCCCCCCTCACGAACCACAGCAGCTCCTCGACCACGCCCTTCCAGTACACACG 7104 ||| || | || | || ||||||||||||||||||| |||||| |||| | ||||| Sbjct 370085 GTTTGTTTCGCCGCGCAGGAACCACAGCAGCTCCTCGCACACGCCGCGCCAGAAAACACG 370026 Query 7105 TTTCGTCGTCA 7115 ||||| |||| Sbjct 370025 CTTCGTTGTCA 370015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448262192678640