Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq27 91.5 4e-13 seq31 87.8 4e-12 >seq27 Length=1656817 Score = 91.5 bits (100), Expect = 4e-13 Identities = 94/122 (77%), Gaps = 6/122 (5%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA---AGCTCA 177980 || || |||||||| || || || || || |||||| | ||||||||||| ||| Sbjct 1129404 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTCGAGGTGGAGGCGAGC--- 1129348 Query 177981 GACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAG 178040 ||||| ||||||||||| || ||||| |||||||| || || ||||| ||||||||| Sbjct 1129347 GACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAG 1129288 Query 178041 CA 178042 || Sbjct 1129287 CA 1129286 >seq31 Length=2885998 Score = 87.8 bits (96), Expect = 4e-12 Identities = 93/121 (77%), Gaps = 4/121 (3%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAG-- 177981 || || |||||||| || || || || || |||||| | || |||||||| || || Sbjct 1478133 CAGATCTTCGTGAAGACGCTGACCGGCAAGACGATCGCGCTGGAGGTGGA--GCCGAGCG 1478076 Query 177982 ACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGC 178041 |||| ||||||||||| || ||||| |||||||| || || ||||| |||||||||| Sbjct 1478075 ACACGATCGAGAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCGCCGGACCAGC 1478016 Query 178042 A 178042 | Sbjct 1478015 A 1478015 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203730629356178