Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20peruviana_20[genbank_20GCA_5F001403695.1_202015-09-17] 37 sequences; 33,890,200 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq31 96.9 3e-15 seq27 84.2 2e-11 >seq31 Length=2885998 Score = 96.9 bits (106), Expect = 3e-15 Identities = 77/93 (83%), Gaps = 0/93 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 |||||||| || || | |||||| ||||||||| ||||||||| ||||| ||||| ||| Sbjct 1475166 CCGCCGCGCAGGCGCAGCACCAGGTGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGAG 1475225 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCG 41728 || ||||| | || || ||||||||||||||| Sbjct 1475226 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCG 1475258 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 41740 CTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGT 41799 ||| ||||||| || | || |||||||||| ||| || ||||| | | || Sbjct 1478014 CTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGT 1478073 Query 41800 GTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTG 41859 |||||||| ||||||||||| || ||||| || || ||||||||||| ||||| ||||| Sbjct 1478074 GTCGCTCGGCTCCACCTCCAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTG 1478133 Query 41860 CATG 41863 |||| Sbjct 1478134 CATG 1478137 >seq27 Length=1656817 Score = 84.2 bits (92), Expect = 2e-11 Identities = 93/124 (75%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 41740 CTGTTGGTCCGCGGGAACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGACACAGT 41799 ||| ||||||| || | || |||||||||| ||| || ||||| | | || Sbjct 1129285 CTGCTGGTCCGGCGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGT 1129344 Query 41800 GTCGCTCGACTCCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTG 41859 |||||||| ||||||||| | || ||||| || || ||||||||||| ||||| ||||| Sbjct 1129345 GTCGCTCGCCTCCACCTCGAGCGCGATCGTCTTGCCGGTCAGCGTCTTCACGAAGATCTG 1129404 Query 41860 CATG 41863 |||| Sbjct 1129405 CATG 1129408 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303786184400