Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq27 107 2e-18 seq22 107 2e-18 >seq27 Length=1026784 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 ||| || ||||||||| || |||||| || ||||||| || | ||||| | Sbjct 858918 ACAACAGACATGCGAAGTCCGTGTGCAGGCCTTCGTCTCGCGAGATGAGCTCGTTGCTGA 858977 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 |||| || || ||||| ||||||||||| || ||||| || | | | ||| || || | Sbjct 858978 ACGTCAGCCCCGGCATCAGGCCACGCTTCTTCAGCCAGAACAGCGCACAGAACGAGCCCG 859037 Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT 33753 |||||||||| || || || || ||||| ||||| |||| ||| | | | |||||| Sbjct 859038 AAAAGAAGATGCCCTCCACCGCGGCAAACGCAATCAGTCGCTCCTGAAAGCTCGCGCTGC 859097 Query 33754 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805 |||||| | |||||| || |||||||| || | || || ||||| Sbjct 859098 TCCCAATCCACCGTACAGCCCACTCTGCCTTCTTCTTGATGCACGGGATCGT 859149 >seq22 Length=633148 Score = 107 bits (118), Expect = 2e-18 Identities = 163/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 33574 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAATTCGTTAGAAA 33633 ||| || ||||||||| || |||||| || ||||||| || | ||||| | Sbjct 480350 ACAACAGACATGCGAAGTCCGTGTGCAGGCCTTCGTCTCGCGAGATGAGCTCGTTGCTGA 480409 Query 33634 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCGG 33693 |||| || || ||||| ||||||||||| || ||||| || | | | ||| || || | Sbjct 480410 ACGTCAGCCCCGGCATCAGGCCACGCTTCTTCAGCCAGAACAGCGCACAGAACGAGCCCG 480469 Query 33694 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT 33753 |||||||||| || || || || ||||| ||||| |||| ||| | | | |||||| Sbjct 480470 AAAAGAAGATGCCCTCCACCGCGGCAAACGCAATCAGTCGCTCCTGAAAGCTCGCGCTGC 480529 Query 33754 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33805 |||||| | |||||| || |||||||| || | || || ||||| Sbjct 480530 TCCCAATCCACCGTACAGCCCACTCTGCCTTCTTCTTGATGCACGGGATCGT 480581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 629815623947280