Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq6 132 4e-26 >seq6 Length=495072 Score = 132 bits (146), Expect = 4e-26 Identities = 280/414 (68%), Gaps = 8/414 (2%) Strand=Plus/Minus Query 20925 AGGGGATCAACGTGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCC 20984 |||| ||| ||||||||| ||| || |||||||| || | ||||||||||| || || Sbjct 357265 AGGGCATCGACGTGGTTGCGGTACACATGGGCGTCGCCGAGGGTGTGCACAAGCTCACCA 357206 Query 20985 GGGGTCAGGCCCGTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTA 21044 || || ||| || | | || || || || || || |||||| ||||| ||| Sbjct 357205 GGCCGCAAGCCTGTCGCCTTCGCCATGAGGATGGTGAGTAGCGCGTAGGAGGCGACGTTG 357146 Query 21045 AACGGGACCCCGAGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTC---- 21100 || || || ||||| ||||| ||| || | |||||||| | |||||||| ||| Sbjct 357145 AAGGGAACGCCGAGTCCCATATCGCACGAGCGCTGGTACACCATGCAGGACAACTCCTTC 357086 Query 21101 -CCCCCGAG-CCACGTAAAACTGACACAAAACGTGACAAGGAGGGAGAGCCATC-CGCGC 21157 || | ||| ||| || |||||| | | ||| || || || || |||||| | | Sbjct 357085 GCCTCTGAGTTCACATAGAACTGAGCAAGTAAGTGGCACGGCGGCAGTGCCATCTCTTTC 357026 Query 21158 GAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCGATCGTGGGGCCGCCTGTTAAT 21217 || ||| |||||||| ||| | | || ||||||||||| || | || Sbjct 357025 AGGGCGCGC-GGGTTCCAGGCGGTAAAGAGGAGGCGCCGATCGTCCGGGTTCAAACGGAT 356967 Query 21218 TAGATCCACCACGTAACGCAGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCC 21277 | || || | || | |||||||||||||| || || ||||| ||||| || Sbjct 356966 TGTGTCTACGATCGCGCGGATCTGGTCCACCCCCTCGCCGTCATAGTTTGCGTCATAACC 356907 Query 21278 CCTGTACTCCGCCCCAAAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATC 21331 |||||||| || || || || | ||||||||| ||||| || || || || || Sbjct 356906 TCTGTACTCTGCACCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCCGAGGTC 356853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427774691406480