Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq27 116 5e-21 seq22 116 5e-21 >seq27 Length=1026784 Score = 116 bits (128), Expect = 5e-21 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || ||||||||| || |||||| || ||||||| || || |||||| | Sbjct 858918 ACAACAGACATGCGAAGTCCGTGTGCAGGCCTTCGTCTCGCGAGATGAGCTCGTTGCTGA 858977 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 |||| || || ||||| ||||||||||| || ||||| || | | | || || || || Sbjct 858978 ACGTCAGCCCCGGCATCAGGCCACGCTTCTTCAGCCAGAACA-GCGCACAGAACGAGCCC 859036 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 ||||||||||| || || || |||||||| |||| |||| ||| | | || |||||| Sbjct 859037 GAAAAGAAGATGCCCTCCACCGCGGCAAACGCAATCAGTCGCTCCTGAAAGCTCGCGCTG 859096 Query 50131 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183 |||||| | |||||| || |||||||| || | || || ||||| Sbjct 859097 CTCCCAATCCACCGTACAGCCCACTCTGCCTTCTTCTTGATGCACGGGATCGT 859149 >seq22 Length=633148 Score = 116 bits (128), Expect = 5e-21 Identities = 167/233 (72%), Gaps = 2/233 (1%) Strand=Plus/Plus Query 49952 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 50011 ||| || ||||||||| || |||||| || ||||||| || || |||||| | Sbjct 480350 ACAACAGACATGCGAAGTCCGTGTGCAGGCCTTCGTCTCGCGAGATGAGCTCGTTGCTGA 480409 Query 50012 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGACCCA 50070 |||| || || ||||| ||||||||||| || ||||| || | | | || || || || Sbjct 480410 ACGTCAGCCCCGGCATCAGGCCACGCTTCTTCAGCCAGAACA-GCGCACAGAACGAGCCC 480468 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGCTG 50130 ||||||||||| || || || |||||||| |||| |||| ||| | | || |||||| Sbjct 480469 GAAAAGAAGATGCCCTCCACCGCGGCAAACGCAATCAGTCGCTCCTGAAAGCTCGCGCTG 480528 Query 50131 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 50183 |||||| | |||||| || |||||||| || | || || ||||| Sbjct 480529 CTCCCAATCCACCGTACAGCCCACTCTGCCTTCTTCTTGATGCACGGGATCGT 480581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718266546431640