Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_006998.1 Length=194711 Score E Sequences producing significant alignments: (Bits) Value seq27 116 5e-21 seq22 116 5e-21 >seq27 Length=1026784 Score = 116 bits (128), Expect = 5e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355 ||| || ||||||||| || |||||| || ||||||| || || |||||| | Sbjct 858918 ACAACAGACATGCGAAGTCCGTGTGCAGGCCTTCGTCTCGCGAGATGAGCTCGTTGCTGA 858977 Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415 |||| || || ||||| ||||||||||| || ||||| || | | | ||| || || | Sbjct 858978 ACGTCAGCCCCGGCATCAGGCCACGCTTCTTCAGCCAGAACAGCGCACAGAACGAGCCCG 859037 Query 33416 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT 33475 |||||||||| || || || || ||||| ||||| |||| ||| | | | |||||| Sbjct 859038 AAAAGAAGATGCCCTCCACCGCGGCAAACGCAATCAGTCGCTCCTGAAAGCTCGCGCTGC 859097 Query 33476 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 |||||| | |||||| || |||||||| || | || || ||||| Sbjct 859098 TCCCAATCCACCGTACAGCCCACTCTGCCTTCTTCTTGATGCACGGGATCGT 859149 >seq22 Length=633148 Score = 116 bits (128), Expect = 5e-21 Identities = 165/232 (71%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 33296 ACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAAA 33355 ||| || ||||||||| || |||||| || ||||||| || || |||||| | Sbjct 480350 ACAACAGACATGCGAAGTCCGTGTGCAGGCCTTCGTCTCGCGAGATGAGCTCGTTGCTGA 480409 Query 33356 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGAAGCGAATGATCCAG 33415 |||| || || ||||| ||||||||||| || ||||| || | | | ||| || || | Sbjct 480410 ACGTCAGCCCCGGCATCAGGCCACGCTTCTTCAGCCAGAACAGCGCACAGAACGAGCCCG 480469 Query 33416 AAAAGAAGATTCCTTCTACTGCAGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGT 33475 |||||||||| || || || || ||||| ||||| |||| ||| | | | |||||| Sbjct 480470 AAAAGAAGATGCCCTCCACCGCGGCAAACGCAATCAGTCGCTCCTGAAAGCTCGCGCTGC 480529 Query 33476 CATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGT 33527 |||||| | |||||| || |||||||| || | || || ||||| Sbjct 480530 TCCCAATCCACCGTACAGCCCACTCTGCCTTCTTCTTGATGCACGGGATCGT 480581 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 622945245503160