Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq27 96.9 4e-15 seq22 96.9 4e-15 >seq27 Length=1026784 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| || ||||||||| || ||| || || ||||||| || | |||||| | Sbjct 858918 ACAACAGACATGCGAAGTCCGTGTGCAGGCCTTCGTCTCGCGAGATGAGCTCGTTGCTGA 858977 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 |||| || || ||||| ||||||||||| || ||||| || | | | || || || || Sbjct 858978 ACGTCAGCCCCGGCATCAGGCCACGCTTCTTCAGCCAGAACA-GCGCACAGAACGAGCCC 859036 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 |||||||| || || || || || ||||| ||||| |||| ||| | | | |||||| Sbjct 859037 GAAAAGAAGATGCCCTCCACCGCGGCAAACGCAATCAGTCGCTCCTGAAAGCTCGCGCTG 859096 Query 32832 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 32886 |||||| | |||||| || |||||||| || | || || || |||| Sbjct 859097 CTCCCAATCCACCGTACAGCCCACTCTGCCTTCTTCTTGATGCACGGGATCGTCT 859151 >seq22 Length=633148 Score = 96.9 bits (106), Expect = 4e-15 Identities = 164/235 (70%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 32653 ACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAA 32712 ||| || ||||||||| || ||| || || ||||||| || | |||||| | Sbjct 480350 ACAACAGACATGCGAAGTCCGTGTGCAGGCCTTCGTCTCGCGAGATGAGCTCGTTGCTGA 480409 Query 32713 ACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCA-AATGATCCA 32771 |||| || || ||||| ||||||||||| || ||||| || | | | || || || || Sbjct 480410 ACGTCAGCCCCGGCATCAGGCCACGCTTCTTCAGCCAGAACA-GCGCACAGAACGAGCCC 480468 Query 32772 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTG 32831 |||||||| || || || || || ||||| ||||| |||| ||| | | | |||||| Sbjct 480469 GAAAAGAAGATGCCCTCCACCGCGGCAAACGCAATCAGTCGCTCCTGAAAGCTCGCGCTG 480528 Query 32832 TCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCT 32886 |||||| | |||||| || |||||||| || | || || || |||| Sbjct 480529 CTCCCAATCCACCGTACAGCCCACTCTGCCTTCTTCTTGATGCACGGGATCGTCT 480583 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633630011979600