Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq28 100 2e-16 >seq28 Length=1158465 Score = 100 bits (110), Expect = 2e-16 Identities = 259/389 (67%), Gaps = 13/389 (3%) Strand=Plus/Minus Query 129990 CATCAAACTCCACATTCCATC-CGCTTCGACTCGTTTCATAAACAAATCGGGTACCCACA 130048 ||||| ||||| | || || | |||| || || ||||| |||||||| || ||||||| Sbjct 334784 CATCAGCGTCCACTTCCCCTCGCCCTTC-ACACGCTTCATGAACAAATCTGGGACCCACA 334726 Query 130049 GGGCGTACAACAAATCTCG----CGCTTTTCTATCCTCGGCACCCATGTTACGTTTCAGT 130104 | ||||| || | || || |||| || ||| | | ||| ||||||| || | Sbjct 334725 GAGCGTAGAAGAGGTCGCGAGCGCGCTGGTC-ATCTTTG---CCCGTGTTACGCTTTAAA 334670 Query 130105 TCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCAACATAAATTGCCATTGCGCCCTTC 130164 | ||| || | | |||||||||||||| |||| || | || | || ||||| Sbjct 334669 AGTAAGAACCCGAAGACATCGGCGTGCCACGGCTCAAGGTACACGGCGAAGGCACCCTTG 334610 Query 130165 CGTTT---GCCCCCTTGGTCAACGTGGCGCACGGCATTGTTGTAGACTCGCAACATTGCC 130221 || || ||| || ||||| |||| ||| ||| |||||| |||| |||| ||| | Sbjct 334609 CGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGCAGCATCGGT 334550 Query 130222 TCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATGAAACTGCCACGAGCCCGAACGTTA 130281 ||| ||||| | ||| || || || | | ||| |||| ||| || || | ||| Sbjct 334549 ACCAGCCCGTTCGACGTACCATTGGTCCCGGCGATGTAACTACCAGCGGCACGGATGTTG 334490 Query 130282 TGAACGCTTAGACCTATGCCGCCGCCAAATTTTGATATCAACGCGCAATCGCGTAGCGTT 130341 || ||| || || ||||| ||| | || |||| || || || ||||| Sbjct 334489 TGCACGTGCAGGCCGATGCCACCGGCCGCCTTACTGATCACGGCACACTCCTTCAGCGTG 334430 Query 130342 TCATAAATGCCAACGATACTGTCTTCTTT 130370 || || ||||| |||| ||||| || || Sbjct 334429 TCGTAGATGCCGTCGATGCTGTCGTCCTT 334401 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419726716025815