Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq27 125 2e-23 seq22 125 2e-23 >seq27 Length=1026784 Score = 125 bits (138), Expect = 2e-23 Identities = 141/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 243532 GAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGA 243591 || ||||| |||||||| | || ||||| || ||||||||||| || | |||| | Sbjct 858840 GAGTTCATCTGCGACGCGCTGCCGGTGCGGCTGATCGGCATGAACTCGGAGTTGATGGCA 858781 Query 243592 CAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTAC 243651 ||||||||||| ||||| || ||||| | ||||| |||| ||| | ||||| ||| Sbjct 858780 CAGTACATCGAGTTCGTGGCGGACCGACTGCTCATCTCGCTCGGTGAGGAGAAGCACTAC 858721 Query 243652 AACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTC 243711 ||| | | | | || |||| ||| |||||| | || ||||| || || || || |||||| Sbjct 858720 AACGCGACGCAGCCATTTGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTC 858661 Query 243712 TTCGAAAAG 243720 ||||| ||| Sbjct 858660 TTCGAGAAG 858652 >seq22 Length=633148 Score = 125 bits (138), Expect = 2e-23 Identities = 141/189 (75%), Gaps = 0/189 (0%) Strand=Plus/Minus Query 243532 GAATTCATTTGCGACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGA 243591 || ||||| |||||||| | || ||||| || ||||||||||| || | |||| | Sbjct 480272 GAGTTCATCTGCGACGCGCTGCCGGTGCGGCTGATCGGCATGAACTCGGAGTTGATGGCA 480213 Query 243592 CAGTACATCGAATTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTAC 243651 ||||||||||| ||||| || ||||| | ||||| |||| ||| | ||||| ||| Sbjct 480212 CAGTACATCGAGTTCGTGGCGGACCGACTGCTCATCTCGCTCGGTGAGGAGAAGCACTAC 480153 Query 243652 AACTCCAAGAACCCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTC 243711 ||| | | | | || |||| ||| |||||| | || ||||| || || || || |||||| Sbjct 480152 AACGCGACGCAGCCATTTGACTTCATGGAGATGATCTCGCTGCAGGGCAAGACGAACTTC 480093 Query 243712 TTCGAAAAG 243720 ||||| ||| Sbjct 480092 TTCGAGAAG 480084 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102876453206850