Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq28 152 6e-32 >seq28 Length=1158465 Score = 152 bits (168), Expect = 6e-32 Identities = 529/811 (65%), Gaps = 37/811 (5%) Strand=Plus/Minus Query 114464 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 114523 || || ||||| ||||| || |||||||| | ||||| || |||||||| | | Sbjct 335086 GGCAGCGCGATGGACGCGAGGTTACACACCGCCGTCTCCTCTGGCGACGTGTACTCGACA 335027 Query 114524 ATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 114583 || || || |||| ||||| | ||| || ||||| | |||||| || |||||||| || Sbjct 335026 ATCTCGGTGCACAGGTTTGAGCACTTGATCGTGCCGAGGTTCTTCTGGTTTGACTTGCTG 334967 Query 114584 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 114643 ||||||||||||||||| || ||| | ||| || ||||| | || |||| || || Sbjct 334966 TTACACGCATCCTTGTACAGGATGAACGGCCCGCCTGTCTCGATCTGCGACTCCAGGATG 334907 Query 114644 GCCTTCCAGACAT-CGGCGGCTGGCACAGTGGCGTT---GGCTCGCCCCTCCTCCTCGTA 114699 || ||| || | | ||| ||| | | | || | | || ||||| |||||| Sbjct 334906 GCAAACCACACCTCCTGCGCCTG----AATCGTCTTCACGCCGCGGCCCTCAGACTCGTA 334851 Query 114700 CTTTGTGTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCT-T 114756 |||||| || ||| | || || | | | ||||| |||| | || | | Sbjct 334850 GCGCTCGTAGAGTCGCTCGAACGCCTCGCCATAGCAGTCGCTGAG-GCCC--GGGCATGT 334794 Query 114757 ATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGG 114816 | ||| | || | ||| | || | ||| |||||||||||||| | ||||| Sbjct 334793 GTTGGGGTCCATCAGCGTCCACTTCCCCTCGCCCTTCACACGCTTCATGAACAAATCTGG 334734 Query 114817 GATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCT--TCTTCATCCCCCTGATTGAGA 114874 || ||| ||||| ||||||| || || |||| ||| || || | ||| || | Sbjct 334733 GACCCACAGAGCGTAGAAGAGGTCGCG--AGCGCGCTGGTCATCTTTGCCC---GTGTTA 334679 Query 114875 CGC---AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATT 114931 ||| || || || | | || ||| ||||||||||| || |||||||| |||| Sbjct 334678 CGCTTTAAAAGTAAGAACCCGAAGACATCGGCGTGCCACGGCTCAAGGTACACGGCGAAG 334619 Query 114932 GACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGA 114988 | ||||| || || ||| |||||| || || | || ||| || || ||||| Sbjct 334618 GCACCCTTGCGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGC 334559 Query 114989 AGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACT--TATTGG 115046 ||||| || | | || | || ||||| || |||| | | ||| | || Sbjct 334558 AGCATCGGTACCAGCCCGTTCGACGTACCATTGGT--CCCGGCGATGTAACTACCAGCGG 334501 Query 115047 CTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACT 115106 | | || | || | ||||| || || || || ||| ||| ||| || |||| Sbjct 334500 CACGGATGTTGTGCACGTGCAGGCCGATGCCACCGGCCGCCTTACTGATCACGGCACACT 334441 Query 115107 CCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGC--- 115163 || | || || ||||||| |||||||| ||| |||| || | || |||| Sbjct 334440 CCTTCAGCGTGTCGTAGATGCCGTCGATGCTGTCGTCCTTCGACGCCACCAGAAAGCACG 334381 Query 115164 AGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGA 115223 |||| |||||| ||| | || || || |||||||||||||| || || ||||| ||| Sbjct 334380 AGCT---CATTTGCGGCTTCGGGGTGCCTGCGTTGAAGAGGGTCGGAGTGGCGTGTGTGA 334324 Query 115224 ACATACCTTGGGACATCTTATCGTAGGTCTC 115254 | | || | |||||| ||||| ||||| Sbjct 334323 AGAAGCCCTTCGACATCAGGTCGTATGTCTC 334293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597351725803080