Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq28 152 6e-32 >seq28 Length=1158465 Score = 152 bits (168), Expect = 6e-32 Identities = 568/874 (65%), Gaps = 35/874 (4%) Strand=Plus/Plus Query 111612 CCACAGTACATGTTCATGCGGGTCGCGATCGGTATCCATGGGGAAGATATTGATTCTGTT 111671 || ||| | ||||||||||| ||||| |||| ||||| || ||| | || || Sbjct 334230 CCGCAGCAGATGTTCATGCGTGTCGCCCTCGGCATCCACGGTCGGGATCTCGAAAACGTG 334289 Query 111672 TTGGAGACATACGACAAGATGTCCCGTGGTATGTTCATCCACGCAACACCAACCCTCTTC 111731 |||||||||||| |||||| || | |||| ||||| || || ||||||||| Sbjct 334290 CGTGAGACATACGACCTGATGTCGAAGGGCTTCTTCACACACGCCACTCCGACCCTCTTC 334349 Query 111732 AACGCTGGTACACCAAGACCCCAAATGTCCAGTTGTTTCCTTATTGCAAACAAGGAGGAT 111791 ||||| || || || | || |||||| | || || || | || ||||| || Sbjct 334350 AACGCAGGCACCCCGAAGCCGCAAATGAGCTCGTGCTTTCTGGTGGCGTCGAAGGACGAC 334409 Query 111792 TCAATCAATGGCATTTACGGCACTCTCACTGAATGTGCCCAAATCTCAAAGTGGGCTGGT 111851 ||| | ||||| |||| ||| || | || |||||| ||| ||| ||| ||| Sbjct 334410 AGCATCGACGGCATCTACGACACGCTGAAGGAGTGTGCCGTGATCAGTAAGGCGGCCGGT 334469 Query 111852 GGTATCGGGATGCACATCCATGATGTCAGAGCCAACAAGTCTCGTA-TTAGA-----GGT 111905 || ||||| ||||| | || | || | ||| || ||| ||| | || Sbjct 334470 GGCATCGGCCTGCACGTGCACAACATCCGTGCC------GCTGGTAGTTACATCGCCGGG 334523 Query 111906 ACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGC 111965 || |||||| || | || | | || ||||| ||||| || ||| ||| || ||| Sbjct 334524 ACCAATGGTACGTCGAACGGGCTGGTACCGATGCTGCGCGTCTTCAACAACACCGCCCGC 334583 Query 111966 TATGTAAACCAAGCTGGGCGT---CGCAAGGGATCTATCGCAGTCTATCTTGAGCCATGG 112022 || || |||| | ||| || |||||||| | |||| || || |||||||| ||| Sbjct 334584 TACGTGGACCAGGGTGGCGGTAAGCGCAAGGGTGCCTTCGCCGTGTACCTTGAGCCGTGG 334643 Query 112023 CACGCGGATATCATGGAGTTC---CTTGAGTTGCGTCTCAACCAAGGTGATGAGGA--GG 112077 ||||| ||| || | | |||| ||| |||| ||| || | || || | Sbjct 334644 CACGCCGATGTCTTCGGGTTCTTACTTTTAAAGCGT---AACACGGGCAAAGATGACCAG 334700 Query 112078 CGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTG 112137 |||| | ||||| ||||||| |||||| ||| | |||||| | ||||||||| | || Sbjct 334701 CGCGCT--CGCGACCTCTTCTACGCTCTGTGGGTCCCAGATTTGTTCATGAAGCGTGTGA 334758 Query 112138 A-GGAGAGTGGCAATTGGTCTCTCTTTTGTCCAGACA-AGGCACCCGGTCTCTCCGA-TG 112194 | || ||| || || ||| | || | || ||| | || || || ||| ||| || Sbjct 334759 AGGGCGAG-GGGAAGTGGACGCTGATGGACCCCAACACATGC-CCGGGCCTCAGCGACTG 334816 Query 112195 CCGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTACGAGGAAGAAAGTCG-GGCGACT 112253 | | || |||| ||| || |||||| |||||| || | || |||| | Sbjct 334817 CTAT-GGCGAGGCGTTCGAGCGACTCTACGAGCGCTACGAGTCTGAGGGCCGCGGCG--T 334873 Query 112254 G-CGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGG 112312 | |||| | | || || |||||| || || || |||| || | |||||| || Sbjct 334874 GAAGACGATTCAGGCGCAGGAGGTGTGGTTTGCCATCCTGGAGTCGCAGATCGAGACAGG 334933 Query 112313 TACACCATATATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGG 112372 || | || || ||||| || || |||||| ||| || || ||||| | || Sbjct 334934 CGGGCCGTTCATCCTGTACAAGGATGCGTGTAACAGCAAGTCAAACCAGAAGAACCTCGG 334993 Query 112373 TGTGATCAAGAGTTCCAACCTCTGTACAGAAATCTTGGAATTTACAGACAAAGATGAGAC 112432 ||||||| | || ||||| || || || || | || | || ||| ||||| Sbjct 334994 CACGATCAAGTGCTCAAACCTGTGCACCGAGATTGTCGAGTACACGTCGCCAGAGGAGAC 335053 Query 112433 GGCTGTGTGTAACCTCGCATCAATCGCTCTCCCC 112466 ||| |||||||||||||| || ||||| || ||| Sbjct 335054 GGCGGTGTGTAACCTCGCGTCCATCGCGCTGCCC 335087 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740452420720