Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq34 86.0 7e-12 seq24 84.2 3e-11 seq27 82.4 9e-11 seq22 82.4 9e-11 >seq34 Length=1609142 Score = 86.0 bits (94), Expect = 7e-12 Identities = 69/82 (84%), Gaps = 1/82 (1%) Strand=Plus/Plus Query 136708 CCGTTCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCG 136767 ||| ||| |||||||||| ||||||||||||| || |||| |||||||||| |||||| Sbjct 443287 CCGCTCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCG 443346 Query 136768 AGCCCCGTTGGGAACAGCTTTT 136789 | ||| ||||||| || ||||| Sbjct 443347 ACCCCTGTTGGGAGCA-CTTTT 443367 >seq24 Length=824354 Score = 84.2 bits (92), Expect = 3e-11 Identities = 66/78 (85%), Gaps = 1/78 (1%) Strand=Plus/Plus Query 136712 TCTTATAGCTCAGTTGGTTAGAGCGTGGTGCTTATAACGCCAAGGTCACGGGTTCGAGCC 136771 ||| |||||||||| ||||||||||||| || |||| |||||||||| ||||||| || Sbjct 614771 TCTCATAGCTCAGTCGGTTAGAGCGTGGGTCTAATAAGCCCAAGGTCACAGGTTCGACCC 614830 Query 136772 CCGTTGGGAACAGCTTTT 136789 | ||||||| || ||||| Sbjct 614831 CTGTTGGGAGCA-CTTTT 614847 >seq27 Length=1026784 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || ||||| || || ||||||||||| || ||||| || || ||||| || || Sbjct 858941 TGCAGGCCTTCGTCTCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCCGGCATCAGGCCA 859000 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| || | ||||| || || |||||||||||||||||||| | Sbjct 859001 CGCTTCTTCAGCCAGAACAGCGCACAGAACGAGCCCGAAAAGAAGATGCCCTCCACCGCG 859060 Query 119628 GCGAAAGCGAATAGACGCTC 119647 || || || | || ||||| Sbjct 859061 GCAAACGCAATCAGTCGCTC 859080 >seq22 Length=633148 Score = 82.4 bits (90), Expect = 9e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Plus Query 119508 TGAAGCCCTTCATCCCGAGAGATGAGCTCATTACTGAAGCAAAGTCCAGGCATGAGTCCT 119567 || || ||||| || || ||||||||||| || ||||| || || ||||| || || Sbjct 480373 TGCAGGCCTTCGTCTCGCGAGATGAGCTCGTTGCTGAACGTCAGCCCCGGCATCAGGCCA 480432 Query 119568 CTTTTCTTTAGCCAAAAGATGGCACAAAAACTTCCAGAAAAGAAGATGCCCTCCACACAG 119627 | ||||| ||||| || | ||||| || || |||||||||||||||||||| | Sbjct 480433 CGCTTCTTCAGCCAGAACAGCGCACAGAACGAGCCCGAAAAGAAGATGCCCTCCACCGCG 480492 Query 119628 GCGAAAGCGAATAGACGCTC 119647 || || || | || ||||| Sbjct 480493 GCAAACGCAATCAGTCGCTC 480512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974152087800