Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq33 107 3e-18 >seq33 Length=1421109 Score = 107 bits (118), Expect = 3e-18 Identities = 233/341 (68%), Gaps = 12/341 (4%) Strand=Plus/Plus Query 136648 CCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGCC 136707 || ||||| || || ||||||| || ||| || || |||||||| | ||| || Sbjct 182082 CCTTTCACACATAGCACTTGCTGCAGCACCGTGACAATTTCAACGAGGTCGTCCTGAGCA 182141 Query 136708 TCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTCC 136767 ||||||| ||| ||||| |||||| ||| || ||||||| | |||||| |||| Sbjct 182142 GCCATGACGGCGCCGATGCTCTTGTACGCCGCGGGTGTTTCGTCCAGCACGCCGCTGTCC 182201 Query 136768 TTGCGGCACTCCACGCCCTCGGTGGC--CTTGATCTGGTCCTCCAGGGTGAA-GGTCGCC 136824 |||||||| || | ||| | || || | | | |||||| ||| |||||| | |||| Sbjct 182202 TTGCGGCATTCGATGCCGACTGTAGCGGCCTCA--TGGTCCGCCACGGTGAATCGGCGCC 182259 Query 136825 TTGGCCTGGGTCCGCGAC---ATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAG 136881 |||| | ||||| | | || || || || |||||||| || |||||| | | Sbjct 182260 -GCGCCTCG--CCGCGGCTGTAGCG-CCTCCCTGCACCGTGCGAACAAGAGCAGTAGCTG 182315 Query 136882 TCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATC 136941 || || |||| || || |||||||||||| |||||||| || || || || | Sbjct 182316 GCCACACTGCCTTTACCTCGCACGATGTAGCTGCGCGCCCCCATGGACCCCGGAATCACG 182375 Query 136942 CCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGT 136982 ||| || || | |||| ||| || || |||||||| Sbjct 182376 GCGAGCTCACCCATACGCGCGGACGTAGCCCCTTTGCGGGT 182416 Score = 86.0 bits (94), Expect = 9e-12 Identities = 113/156 (72%), Gaps = 12/156 (8%) Strand=Plus/Plus Query 137244 CATCTC---CTTGGCCTTCTCGATGAAGATGCGGCCGATGGTGTTGCCGACGCCGCGCGA 137300 |||||| |||||| ||| ||||||| | |||||| |||||| || |||||||| Sbjct 182732 CATCTCTTTCTTGGCGAGCTCAATGAAGACGGACCCGATGCGGTTGCCCACACCGCGCGA 182791 Query 137301 GCCCGAGTGGAGCATCACCCAGAC--------GCG-CTGGTCCTCGTCGAGGCAGACCTC 137351 || ||||| ||||| ||||| || ||| ||| | || || ||||| | ||| Sbjct 182792 CCCGGAGTGCAGCATGACCCACACATGCTGCCGCGGCTGCTGGTCATCCAGGCACAGCTC 182851 Query 137352 GATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTG 137387 |||||||||||| || ||| || |||||||| || Sbjct 182852 GATGAAGTGGTTTCCTGTGCCAAGTGTGCCCAGGTG 182887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690141834673200