Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq33 104 3e-17 >seq33 Length=1421109 Score = 104 bits (114), Expect = 3e-17 Identities = 232/341 (68%), Gaps = 12/341 (4%) Strand=Plus/Plus Query 135408 CCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGGCC 135467 || ||||| || || ||||||| || ||| || || |||||||| | ||| || Sbjct 182082 CCTTTCACACATAGCACTTGCTGCAGCACCGTGACAATTTCAACGAGGTCGTCCTGAGCA 182141 Query 135468 TCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGTCC 135527 ||||||| ||| ||||| |||||| ||| || ||||||| | |||||| |||| Sbjct 182142 GCCATGACGGCGCCGATGCTCTTGTACGCCGCGGGTGTTTCGTCCAGCACGCCGCTGTCC 182201 Query 135528 TTACGGCACTCCACGCCCTCGGTGGC--CTTGATCTGGTCCTCCAGGGTGAAG-GTCGCC 135584 || ||||| || | ||| | || || | | || ||||| ||| |||||| | |||| Sbjct 182202 TTGCGGCATTCGATGCCGACTGTAGCGGCCTCAT--GGTCCGCCACGGTGAATCGGCGCC 182259 Query 135585 TTGGCCTGGGTCCGCGAC---ATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACGAG 135641 | ||| | ||||| | | || || || || |||||||| || |||||| | | Sbjct 182260 GCG-CCTCG--CCGCGGCTGTAGCG-CCTCCCTGCACCGTGCGAACAAGAGCAGTAGCTG 182315 Query 135642 TCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATC 135701 || || |||| || || |||||||||||| |||||||| || || || || | Sbjct 182316 GCCACACTGCCTTTACCTCGCACGATGTAGCTGCGCGCCCCCATGGACCCCGGAATCACG 182375 Query 135702 CCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGT 135742 ||| || || | |||| ||| || || |||||||| Sbjct 182376 GCGAGCTCACCCATACGCGCGGACGTAGCCCCTTTGCGGGT 182416 Score = 84.2 bits (92), Expect = 3e-11 Identities = 115/158 (73%), Gaps = 16/158 (10%) Strand=Plus/Plus Query 136004 CATCTC---CTTGGCCTTCTCGATGAAGATACGG--CCGATGGTGTTGCCGACGCCGCGC 136058 |||||| |||||| ||| ||||||| ||| |||||| |||||| || |||||| Sbjct 182732 CATCTCTTTCTTGGCGAGCTCAATGAAGA--CGGACCCGATGCGGTTGCCCACACCGCGC 182789 Query 136059 GAGCCCGAGTGGAGCATCACCCAGAC--------GCG-CTGGTCCTCGTCGAGGCAGACC 136109 || || ||||| ||||| ||||| || ||| ||| | || || ||||| | | Sbjct 182790 GACCCGGAGTGCAGCATGACCCACACATGCTGCCGCGGCTGCTGGTCATCCAGGCACAGC 182849 Query 136110 TCGATGAAGTGGTTGCCGCCGCCCAGGGTGCCCAGTTG 136147 |||||||||||||| || ||| || |||||||| || Sbjct 182850 TCGATGAAGTGGTTTCCTGTGCCAAGTGTGCCCAGGTG 182887 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700442602354440