Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq28 145 2e-29 >seq28 Length=1158465 Score = 145 bits (160), Expect = 2e-29 Identities = 621/968 (64%), Gaps = 30/968 (3%) Strand=Plus/Minus Query 155589 ATAGACGCCAGATTACATACCGCAGTCTCCT-TGTCGTCGCTGTATTCTACAATCTCACA 155647 || ||||| || ||||| ||||| ||||||| || || || |||| || |||||||| Sbjct 335077 ATGGACGCGAGGTTACACACCGCCGTCTCCTCTGGCGACG-TGTACTCGACAATCTCGGT 335019 Query 155648 GCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGC 155707 ||||||||| || | |||||| ||||| | ||||||||||| || || |||||||| || Sbjct 335018 GCACAGGTTTGAGCACTTGATCGTGCCGAGGTTCTTCTGGTTTGACTTGCTGTTACACGC 334959 Query 155708 ATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATCTTTAGCCA 155767 ||||||||| || ||| | || |||||||| ||||| | ||||| || | ||| Sbjct 334958 ATCCTTGTACAGGATGAACGGCCCGCCTGTCTCGATCTGCGACTCCAGGATGGCAAACCA 334899 Query 155768 GAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGACTCATATTTCATATACAG 155827 | || | || | ||| ||| | | ||| || ||||| || | || || Sbjct 334898 CACCTCCTGCGCCTGAATCGTCTTCACGCCGCGGCCCTCAGACTCGTAGCGCTCGTAGAG 334839 Query 155828 -CGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCACTTATCGGGGCAAAACA 155886 || || | | |||| || || || || || || || ||||| | | |||| | || Sbjct 334838 TCGCTC-GAACGCCTCGCCATAGCAGTCGCTGAGGCCCGGGCATGTGTTGGGGTCCATCA 334780 Query 155887 GCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCACTCGCCCAAATAGCAT 155946 ||| ||| | | || | ||||||| ||| || | ||| |||| | ||| | Sbjct 334779 GCGTCCACTTCCCCTCGCCCTTCACACGCTTCATGAACAAATCTGGGACCCACAGAGCGT 334720 Query 155947 AGAAAAGGTCCCTTGC-CTTTGACTCCTCATCG-CCGTGATTCTTCCGTAGCTCTAAGAA 156004 |||| ||||| | || | || || || | | ||||| || | || |||||| Sbjct 334719 AGAAGAGGTCGCGAGCGCGCTG-GTCATCTTTGCCCGTG-TTACGCTTTAAAAGTAAGAA 334662 Query 156005 TTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTACCATTCCTCTT--- 156061 | | ||| | || ||||| || |||| || || ||| || | ||| Sbjct 334661 CCCGAAGACATCGGCGTGCCACGGCTCAAGGTACACGGCGAAGGCACCCTTGCGCTTACC 334602 Query 156062 GCCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGCATAGGAATAATACC 156121 ||||||||| || || || || || || || |||||||| | ||||| || | | || Sbjct 334601 GCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGCAGCATCGGTACCAGCCC 334542 Query 156122 ATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGAACATTATGAATATG 156181 || || || |||||||| ||| || | ||||| | || | || || | || Sbjct 334541 GTTCGACGTACCATTGGTCCCGGCGATGTAACTACCAGCGGCACGGATGTTGTGCACGTG 334482 Query 156182 TAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTTACAGTATTGAAAAT 156241 || || || ||||| | | ||| || || || ||||| | || | | | || Sbjct 334481 CAGGCCGATGCCACCGGCCGCCTTACTGATCACGGCACACTCCTTCAGCGTGTCGTAGAT 334422 Query 156242 ACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTTAATTGAGG--TCGT 156299 || || || || || | | | | ||| ||||||| || | ||| || ||| Sbjct 334421 GCCGTCGATGCTGTCGTCCTTCGACGCCACCAGAAAGCACGAGCTCATTTGCGGCTTCGG 334362 Query 156300 GGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTATTAGACATATAA 156359 |||| || |||||||| || || || || || || | || | || ||||| Sbjct 334361 GGTG--CCTGCGTTGAAGAGGGTCGGAGTGGCGTGTGTGAAGAAGCCCTTCGACATCAGG 334304 Query 156360 TCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAATACAGATAGAGACCCTCATC 156419 ||||||||||| | || || |||| ||||| || | || | ||| | ||| Sbjct 334303 TCGTATGTCTCACGCACGTTTTCGAGATCCCGACCGTGGATGCCGAGGGCGACACGCATG 334244 Query 156420 CACATATGCTGAGGACGCTCTACAAT---CA-CTCC-----------ATCAATTCGCAGA 156464 |||| ||||| |||||||| ||||| || |||| || || |||||| Sbjct 334243 AACATCTGCTGCGGACGCTCCACAATGCGCATCTCCCCCCTGCCGGTCTCGATGCGCAGA 334184 Query 156465 AGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATAATCAAACAGAAAATCACGGTTGTAA 156524 ||||| | ||| ||||| || || |||| || | || || || || ||| ||| Sbjct 334183 AGGTACGAGCGCTCCAGCGTCTTGTACCCAAAGAACTCGAAGTTCAAGTCGCGGGAGTAG 334124 Query 156525 TCAATCAT 156532 |||||||| Sbjct 334123 TCAATCAT 334116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471812866726587