Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_023006.1 Length=43564 Score E Sequences producing significant alignments: (Bits) Value seq33 91.5 4e-14 >seq33 Length=1421109 Score = 91.5 bits (100), Expect = 4e-14 Identities = 231/347 (67%), Gaps = 6/347 (2%) Strand=Plus/Minus Query 37172 TTACCCGCAAAGGTGCT--GTTCGGGCCCGCGAGGGCGACCTGGGCATCATCCCTGGCTC 37229 ||||||||||||| ||| || | || || ||| || || | | | || || || || Sbjct 182418 TTACCCGCAAAGGGGCTACGTCC--GCGCGTATGGGTGAGCTCGCCGTGATTCCGGGGTC 182361 Query 37230 GATGGGTGCGAAGTCATTCATCGTTCGCGGCAAGGGAAATTCCGAATCGTTCTGCTCTTG 37289 ||||| ||| | |||||| || || || || | | | | ||||||||| Sbjct 182360 CATGGGGGCGCGCAGCTACATCGTGCGAGGTAAAGGCAGTGTGGCCAGCTACTGCTCTTG 182301 Query 37290 CAGCCACGGTGCCGGTCGAATGATGAGCCGGGCCGAAGCAAAACGCCGGTTCACAGTCGA 37349 |||||||| || | ||||| | ||| || ||||| ||||| || | Sbjct 182300 TTCGCACGGTGCAGGGAGGCGCTACAGCCGCGGCGAGGCGCGGCGCCGATTCACCGTGGC 182241 Query 37350 GGATCATGAGGCGGCCACCAAAGGTATCGAGTGCCGCAAAGATGCCGAAGTGATCGACGA 37409 ||| |||||||| || || || ||||| |||||||| || || ||| | ||||| Sbjct 182240 GGACCATGAGGCCGCTACAGTCGGCATCGAATGCCGCAAGGACAGCGGCGTGCTGGACGA 182181 Query 37410 GACGCCAGCGGCTTACAAGGACATCGATGCGGTCATGGCCGCGCAATCCGCCCTGGTGGA 37469 || || ||||| |||||| ||||| || |||||||| || || || ||| || || Sbjct 182180 AACACCCGCGGCGTACAAGAGCATCGGCGCCGTCATGGCTGCTCAGGACGACCTCGTTGA 182121 Query 37470 CATCGTGCAC-ACGCTGCGCCAAGTCGTTTGCGTGAAGGGTTGAGGA 37515 || || ||| ||||| ||||| | || ||||| || |||||| Sbjct 182120 AATTGT-CACGGTGCTGCAGCAAGTGCTATGTGTGAAAGGATGAGGA 182075 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 139282784849012