Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_026421.1 Length=182380 Score E Sequences producing significant alignments: (Bits) Value seq6 167 3e-36 >seq6 Length=495072 Score = 167 bits (184), Expect = 3e-36 Identities = 403/597 (68%), Gaps = 20/597 (3%) Strand=Plus/Minus Query 146917 TTCAGGGGCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCCCAGGGTGTGCACAAAGTCC 146976 || |||| || ||||||||| |||| || || ||||| || ||||||||||||| || Sbjct 357268 TTGAGGGCATCGACGTGGTTGCGGTACACATGGGCGTCGCCGAGGGTGTGCACAAGCTCA 357209 Query 146977 CCCGGCTTAAGGCCGGTCACGTGGGCCACCATGTAGGTGAGCAGCGAGTAGCTGGCTATG 147036 || ||| | ||| ||| | | |||| | | |||||| |||| |||| ||| | | Sbjct 357208 CCAGGCCGCAAGCCTGTCGCCTTCGCCATGAGGATGGTGAGTAGCGCGTAGGAGGCGACG 357149 Query 147037 TTGAAGGGGACCCCCAGGCCCATGTCCCCCGACCTCTGGTACAGCTGGCACGAGAGCTCC 147096 |||||||| || || || ||||| || | ||| | |||||||| | ||| || | |||| Sbjct 357148 TTGAAGGGAACGCCGAGTCCCATATCGCACGAGCGCTGGTACACCATGCAGGACAACTCC 357089 Query 147097 -CCGTC-----GGCCACGTAAAACTG-GCACAGGATGTGGCACGGCGGCAGCGCCATGGC 147149 || | | ||| || ||||| ||| || | ||||||||||||||| ||||| | Sbjct 357088 TTCGCCTCTGAGTTCACATAGAACTGAGCA-AGTAAGTGGCACGGCGGCAGTGCCATCTC 357030 Query 147150 GGGCAGGTC-CGCGGGGTTCCAGGCCGAGACCACCAGCCGCCTGCTC-TCGGGGTTC--- 147204 |||| | ||| ||||||||||| | | | || |||| | || || |||||| Sbjct 357029 TTTCAGGGCGCGC-GGGTTCCAGGCGGTAAAGAGGAGGCGCC-GATCGTCCGGGTTCAAA 356972 Query 147205 CTCTTAATCTCTTCGATAACCCACCTCAGCTGGTCCACGCCCTGGCCCCCGTAGTTTGTC 147264 | | | ||| |||| | | | ||||||||| |||| ||| | ||||||| Sbjct 356971 CGGATTGTGTCTACGAT---CGCGCGGATCTGGTCCACCCCCTCGCCGTCATAGTTTGCG 356915 Query 147265 CCGCAGTCCACGTACCTGGCCCCAAAGTGCCTCCACTGGAAGCCGTACACTGGCCCCAGG 147324 | | | |||| || || ||||| | ||||||||||||||| || || || ||| Sbjct 356914 TCATAACCTCTGTACTCTGCACCGAAGTGGCGCCACTGGAAGCCGTAGACAGGGCCGAGG 356855 Query 147325 TCGCCGGGCTTTCTGTGCGAGAAGCCCGC-CCGCTTGAGAAACTCGGGGGACCCGTGGGC 147383 || | |||| | || ||||| | | | ||||||||| | || |||| | | Sbjct 356854 TC-CATCTCTTTATTCTCGGTCAGCCCACGGCTGTCAAGAAACTCGCGCGAGCCGTTGCC 356796 Query 147384 GTCCCAGATGCCCACTCCCTTGGCGGAGAGCTCCTTAGAGTCCGTGGAGCCCCGGATGAA 147443 |||||| || | ||||| | | ||| || | || ||| ||| || | ||| Sbjct 356795 GTCCCAAATATGAATGCCCTTATCCGCCAGCAGCTGCGCGTTCGTCTCGCCGCGCAGGAA 356736 Query 147444 CCAGAGCAGCTCCTCCAAAACCCCCCTCCAAAAGACCCTCTTGGTGGTCAGCAGGGG 147500 ||| ||||||||||| | || || | ||| ||||| | ||| || || || || || Sbjct 356735 CCACAGCAGCTCCTCGCACACGCCGCGCCAGAAGACGCGCTTTGTTGTAAGGAGCGG 356679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583486169306400