Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq28 84.2 2e-11 >seq28 Length=1158465 Score = 84.2 bits (92), Expect = 2e-11 Identities = 229/350 (65%), Gaps = 3/350 (1%) Strand=Plus/Minus Query 131648 ACTCGCTTCATAAACAAATCCGGCACCCATAACGCGTACAACAGATCTCTAGCTTTTTTC 131707 || |||||||| |||||||| || ||||| | ||||| || || || | ||| | Sbjct 334756 ACACGCTTCATGAACAAATCTGGGACCCACAGAGCGTAGAAGAGGTCGCGAGCGCGCTGG 334697 Query 131708 TCTTCTGTACCCATAAtttttttCAAATTTAAAAAGTCCAAAATGTCCGCATGCCAGGGT 131767 || ||| | ||| | | || ||| ||| || | || | || || ||||| || Sbjct 334696 TCATCTTTGCCCGTGTTACGCTTTAAAAGTAAGAACCCGAAGACATCGGCGTGCCACGGC 334637 Query 131768 TCCAAATACACTGCCATTGCGCCTTTGCGCTTACCG---CCTTGATTAACATGACGAACC 131824 || | ||||| || | || || |||||||||||| || || | || | || | Sbjct 334636 TCAAGGTACACGGCGAAGGCACCCTTGCGCTTACCGCCACCCTGGTCCACGTAGCGGGCG 334577 Query 131825 ATGTTGTTGTATACGCGCAACATGGGCTCCAAACCGTTGGCGTTTCCATTGGTGCTCTTA 131884 |||||||| | ||||||| ||| || ||| ||||| | | |||||||| | Sbjct 334576 GTGTTGTTGAAGACGCGCAGCATCGGTACCAGCCCGTTCGACGTACCATTGGTCCCGGCG 334517 Query 131885 ATGTAGCTGCCATTGGCTCTGATTTTGTGAACGTTGAGTCCAATACCTCCGCCGTATTTA 131944 ||||| || ||| ||| | ||| ||||| |||| || || || || ||| | ||| Sbjct 334516 ATGTAACTACCAGCGGCACGGATGTTGTGCACGTGCAGGCCGATGCCACCGGCCGCCTTA 334457 Query 131945 GAGATTAGTGCGCATTTGGTTAGAGTGTTATAGATACCTTCCACGCTGTC 131994 ||| | || || | | || |||| ||||| || || | |||||| Sbjct 334456 CTGATCACGGCACACTCCTTCAGCGTGTCGTAGATGCCGTCGATGCTGTC 334407 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424933100099112