Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq28 149 8e-31 >seq28 Length=1158465 Score = 149 bits (164), Expect = 8e-31 Identities = 528/810 (65%), Gaps = 35/810 (4%) Strand=Plus/Minus Query 118704 GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATA 118763 || || ||||| ||||| || |||||||| | ||||| || |||||||| | | Sbjct 335086 GGCAGCGCGATGGACGCGAGGTTACACACCGCCGTCTCCTCTGGCGACGTGTACTCGACA 335027 Query 118764 ATTTCCGTGCACAAGTTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTG 118823 || || ||||||| |||||| | ||| || ||||| | |||||| || |||||||| || Sbjct 335026 ATCTCGGTGCACAGGTTTGAGCACTTGATCGTGCCGAGGTTCTTCTGGTTTGACTTGCTG 334967 Query 118824 TTACACGCATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATA 118883 ||||||||||||||||| || ||| | ||| || ||||| | || |||| || || Sbjct 334966 TTACACGCATCCTTGTACAGGATGAACGGCCCGCCTGTCTCGATCTGCGACTCCAGGATG 334907 Query 118884 GCCTTCCAGACATCGGCAGCTGGCACAGTGGCGTT---GGCTCGCCCCTCTTCCTCGTAC 118940 || ||| || || | || | | | | | || | | || ||||| |||||| Sbjct 334906 GCAAACCACACCTC--CTGC-GCCTGAATCGTCTTCACGCCGCGGCCCTCAGACTCGTAG 334850 Query 118941 TTTGTGTAGAGGGCTTCAAACTCTTCACC--CACGGCCTCTGAGAGCCCTGGTGCCT-TA 118997 |||||| || ||| | || || | | | ||||| |||| | || | | Sbjct 334849 CGCTCGTAGAGTCGCTCGAACGCCTCGCCATAGCAGTCGCTGAG-GCCC--GGGCATGTG 334793 Query 118998 TCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGG 119057 | ||| | || | ||| | || | ||| || ||||||||||| | |||||| Sbjct 334792 TTGGGGTCCATCAGCGTCCACTTCCCCTCGCCCTTCACACGCTTCATGAACAAATCTGGG 334733 Query 119058 ATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCT--TCTTCATCCCCCTGATTGAGAC 119115 | ||| || || ||||||| || || |||| ||| || || | ||| || || Sbjct 334732 ACCCACAGAGCGTAGAAGAGGTCGCG--AGCGCGCTGGTCATCTTTGCCC---GTGTTAC 334678 Query 119116 GC---AACTCCAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG 119172 || || || || | | || ||| ||||||||||| || |||||||| |||| | Sbjct 334677 GCTTTAAAAGTAAGAACCCGAAGACATCGGCGTGCCACGGCTCAAGGTACACGGCGAAGG 334618 Query 119173 ACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCAGTGGCGTTAAATACACGAA 119229 ||||| || || ||| |||||| || || | || ||| ||| || || || | Sbjct 334617 CACCCTTGCGCTTACCGCCACCCTGGTCCACGTAGCGGGCGGTGTTGTTGAAGACGCGCA 334558 Query 119230 GCATTGGAATGATACCATCGGATTGGCCATTTGTCCCCCGAATACGAGACT--TATTGGC 119287 |||| || | | || | || ||||| || |||| | | ||| | ||| Sbjct 334557 GCATCGGTACCAGCCCGTTCGACGTACCATTGGT--CCCGGCGATGTAACTACCAGCGGC 334500 Query 119288 TCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTC 119347 | || | ||| | ||||| || || || || ||| ||| ||| || ||||| Sbjct 334499 ACGGATGTTGTGCACGTGCAGGCCGATGCCACCGGCCGCCTTACTGATCACGGCACACTC 334440 Query 119348 CGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGC---A 119404 | | || || ||||||| || ||||| ||| |||| || | || |||| | Sbjct 334439 CTTCAGCGTGTCGTAGATGCCGTCGATGCTGTCGTCCTTCGACGCCACCAGAAAGCACGA 334380 Query 119405 GCTCGACATTTGAGGCCTGGGTGTACCAGCGTTGAAGAGAGTTGGTGTCGCGTGGATGAA 119464 ||| |||||| ||| | || || || ||||||||||| || || || ||||| |||| Sbjct 334379 GCT---CATTTGCGGCTTCGGGGTGCCTGCGTTGAAGAGGGTCGGAGTGGCGTGTGTGAA 334323 Query 119465 CATACCTTGGGACATCTTGTCGTAGGTCTC 119494 | || | |||||| |||||| ||||| Sbjct 334322 GAAGCCCTTCGACATCAGGTCGTATGTCTC 334293 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618433259659560