Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq36 84.2 5e-11 >seq36 Length=2618838 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 || || || || || |||||||| || |||||||| || ||||| || || | || || Sbjct 1341297 AGCACCAGATGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCCAGCGTGCGGCCCTCC 1341356 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGG 211003 |||||||||||||| || ||||| ||||| || ||||| || Sbjct 1341357 TCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCTGG 1341397 Score = 84.2 bits (92), Expect = 5e-11 Identities = 84/108 (78%), Gaps = 6/108 (6%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCT---TTCAACC 211067 || ||||||||||||||||| |||||||| ||||| ||||| ||| || ||| Sbjct 1341509 CCCTCCTTGTCCTGGATCTTGGCCTTCACGTTCTCGATCGTGTC---GCTCGCCTCCACC 1341565 Query 211068 TCGAGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATT 211115 || || | ||||||||| || ||||| ||||| ||||| | ||||||| Sbjct 1341566 TCCAGCGCGATCGTCTTGCCGGTGAGCGTCTTCACAAAGATCTGCATT 1341613 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159148272239615