Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20sp._20MAR_20LEM2494_20[genbank_20GCA_5F000409445.2_2020 16-05-17] 251 sequences; 30,813,970 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq28 113 9e-20 seq36 109 1e-18 >seq28 Length=1158465 Score = 113 bits (124), Expect = 9e-20 Identities = 231/340 (68%), Gaps = 10/340 (3%) Strand=Plus/Minus Query 273780 GTGAAAATGTACCTGGCACTCGCATGGTCCTTGCCACCTTGCAGCCTCGAACCAAACTGA 273839 ||||| ||||| | | | |||||||||||||| || ||||| | || ||||||||| Sbjct 916404 GTGAAGATGTAGCGGCCTGCGGCATGGTCCTTGCCGCCGTGCAGACGCGTACCAAACTGG 916345 Query 273840 CCCTC---GGGCAGTAGCCAGTTTATGTTGTTGCTACCGACGTAATCCTGAGCCATATTC 273896 || || | |||| ||| | |||||||| ||||| | ||||| ||||| Sbjct 916344 CCATCCTTGCGCAGCAGCGGC---ACATTGTTGCTGCCGACAAAGTCCTGTGCCATTCCG 916288 Query 273897 ACGATAGTCCCCTGAAGGGATACCTCGCCGTGGTGATAGGCGCTGTGTTCGGCGATATAA 273956 ||||| ||| ||| || |||||||||||| |||||| ||| |||| || || Sbjct 916287 ACGATGGTCTGTACAAGCGACTGCTCGCCGTGGTGGTAGGCGGAGTGCTCGGAGACGTAG 916228 Query 273957 CCACTGAACTGAGCAACCTTCACATCGCTCGTCAAGTTTCGCTTGAATGCGGAATACAAC 274016 || | ||| ||||||| | || | |||||| |||||||| ||| | | Sbjct 916227 CCGGCAAGCTGCACAACCTTGATGGCGTTTACCAAGTTGCGCTTGAAGCAGGAGAAGAGG 916168 Query 274017 ACCTTCCGCTGCGAGGGCTTGAACCCATCAACGACCGATGGAATACTGCGTTCCAAATCA 274076 | ||| ||||| ||||||||| || || | | ||| || ||||| || | || Sbjct 916167 ATCTTACGCTGGCCGGGCTTGAAGCCGTCGATCGCGCTTGGGATGCTGCGCTCGCAGTC- 916109 Query 274077 TACCGA--GAGAACAAAATCAGTTCCTTGTCAATGAAGTC 274114 | ||| ||||| | |||||| |||||||| | |||||| Sbjct 916108 -AGCGATGGAGAAAAGAATCAGCTCCTTGTCGACGAAGTC 916070 >seq36 Length=2618838 Score = 109 bits (120), Expect = 1e-18 Identities = 92/113 (81%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| |||||||| || |||||||| | |||| || || |||||||||||||| || Sbjct 1341282 CCACCGCGCAGGCGCAGCACCAGATGCAGCGTGGACTCCTTCTGGATGTTGTAGTCCGCC 1341341 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 ||||||||||| ||||| || || || ||||||||||||| || || ||||| Sbjct 1341342 AGCGTGCGGCCCTCCTCCAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTC 1341394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046735833752154