Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Leishmania_20turanica_20[genbank_20GCA_5F000441995.1_202013-07-29] 336 sequences; 32,320,007 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq72 113 1e-19 seq33 113 1e-19 seq13 84.2 5e-11 >seq72 Length=122406 Score = 113 bits (124), Expect = 1e-19 Identities = 291/441 (66%), Gaps = 7/441 (2%) Strand=Plus/Plus Query 230203 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 230262 || || || ||| | ||||||||| |||||||| | || |||||| ||| ||| Sbjct 112780 GTGGAGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGT 112839 Query 230263 GTGATGCCTGGCCT--CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATC 230320 ||||||| || || || || | |||||| ||||| |||||||||||||| || Sbjct 112840 CTGATGCCAGGGCTGACGTTCAGC--AACGAGCTCATCTCGCGCGACGAGGGTCTACACA 112897 Query 230321 AACAGTTCGGCGAGCTTATGTAT---TCAAAGCTCCAGAACAAGCTACCATTCGAGACGG 230377 | |||| || |||| || | || || ||||||| || |||| | Sbjct 112898 CGGACTTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCGCGCGAGCGCG 112957 Query 230378 TCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTC 230437 | | || || || || || | | ||| |||||||| || ||||| | | Sbjct 112958 TGCTGGAGATTATCGTGGATGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGC 113017 Query 230438 CATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCG 230497 | || || |||||||||||||| || || |||| ||||||||||| ||||| || | Sbjct 113018 CGGTGCGGCTGATTGGCATGAACGCGGAGCTGATGGCGCAGTACATCGAGTTCGTCGCGG 113077 Query 230498 ACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCAT 230557 |||| | | || | || || | ||||| ||| |||| | | | || || | | Sbjct 113078 ACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTACCACTCGACGCAGCCATTCGACT 113137 Query 230558 TTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACT 230617 | |||||| | || || || || || || || ||||||||||| ||| | || | || | Sbjct 113138 TCATGGAGATGATCTCTCTGCAGGGCAAAACGAACTTCTTCGAGAAGAGGGTGGGGGAGT 113197 Query 230618 ATCAGAGGCCTGGTGTGATGA 230638 | |||| | | || ||||||| Sbjct 113198 ACCAGAAGGCCGGCGTGATGA 113218 >seq33 Length=364854 Score = 113 bits (124), Expect = 1e-19 Identities = 291/441 (66%), Gaps = 7/441 (2%) Strand=Plus/Minus Query 230203 GTTGAAGGTATTCTGTTTTCCGGGAGTTTCTGCGCCATCTTTTGGCTGCGGAACAAAGGT 230262 || || || ||| | ||||||||| |||||||| | || |||||| ||| ||| Sbjct 190559 GTGGAGGGCATTTTCTTTTCCGGGTCGTTCTGCGCGCTGTTCTGGCTGAAGAAGCGCGGT 190500 Query 230263 GTGATGCCTGGCCT--CGGTCTGTCTAACGAGTTCATCAGTCGCGACGAGGGTCTCCATC 230320 ||||||| || || || || | |||||| ||||| |||||||||||||| || Sbjct 190499 CTGATGCCAGGGCTGACGTTCAGC--AACGAGCTCATCTCGCGCGACGAGGGTCTACACA 190442 Query 230321 AACAGTTCGGCGAGCTTATGTAT---TCAAAGCTCCAGAACAAGCTACCATTCGAGACGG 230377 | |||| || |||| || | || || ||||||| || |||| | Sbjct 190441 CGGACTTCGCATGCCTGCTGTACAACTCGCACATCAAGCACAAGCTGCCGCGCGAGCGCG 190382 Query 230378 TCAAACAAATCATTACAGAAGCAGTTGAAAACGAAAAGGAGTTCATTTGTGACGCTATTC 230437 | | || || || || || | | ||| |||||||| || ||||| | | Sbjct 190381 TGCTGGAGATTATCGTGGATGCGGTGAACATCGAGCGCGAGTTCATCTGCGACGCGCTGC 190322 Query 230438 CATGTCGCCTTATTGGCATGAACGCTGAACTTATGGGACAGTACATCGAATTCGTAGCCG 230497 | || || |||||||||||||| || || |||| ||||||||||| ||||| || | Sbjct 190321 CGGTGCGGCTGATTGGCATGAACGCGGAGCTGATGGCGCAGTACATCGAGTTCGTCGCGG 190262 Query 230498 ACCGCATTTTTGTTGCACTTGGTTACGAGAAAGTGTACAACTCTAAGAACCCCTTTGCAT 230557 |||| | | || | || || | ||||| ||| |||| | | | || || | || Sbjct 190261 ACCGGCTGCTGGTGTCGCTCGGCGAGGAGAAGCACTACCACTCGACGCAGCCGTTCGAAT 190202 Query 230558 TTATGGAGCTCATTTCGCTTCAAGGGAAGACCAACTTCTTCGAAAAGCGTGTCAGTGACT 230617 | |||||| | || ||||| || || || || ||||||||||| | | || | || | Sbjct 190201 TCATGGAGATGATCTCGCTGCAGGGCAAAACAAACTTCTTCGAGAGGAAGGTGGGGGAGT 190142 Query 230618 ATCAGAGGCCTGGTGTGATGA 230638 | |||| | | || ||||||| Sbjct 190141 ACCAGAAGGCCGGCGTGATGA 190121 >seq13 Length=506622 Score = 84.2 bits (92), Expect = 5e-11 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Plus Query 165715 TCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGCCCCAC 165774 ||||||||||| |||||||||| | ||||||| || ||||||||||||||||||||||| Sbjct 233666 TCTAGCTCAGTTGGTAGAGCGCGTGGCTTTTAACCTCGTGGTCGTGGGTTCGAGCCCCAC 233725 Query 165775 G 165775 | Sbjct 233726 G 233726 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057819446067680